STRINGSTRING
suds3 suds3 LOC113125963 LOC113125963 ENSMAMP00000007022 ENSMAMP00000007022 ENSMAMP00000010092 ENSMAMP00000010092 ENSMAMP00000011825 ENSMAMP00000011825 ENSMAMP00000013148 ENSMAMP00000013148 hdac8 hdac8 LOC113122610 LOC113122610 ENSMAMP00000019454 ENSMAMP00000019454 rest rest LOC113137822 LOC113137822 ing1 ing1 LOC113130068 LOC113130068 ENSMAMP00000025634 ENSMAMP00000025634 wdr73 wdr73 rcor3 rcor3 sap30l sap30l hdac10 hdac10
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
suds3SDS3 homolog, SIN3A corepressor complex component. (318 aa)
LOC113125963Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. (482 aa)
ENSMAMP00000007022SIN3 transcription regulator family member B. (1332 aa)
ENSMAMP00000010092AT rich interactive domain 4A (RBP1-like). (1143 aa)
ENSMAMP00000011825BRMS1 like transcriptional repressor b. (366 aa)
ENSMAMP00000013148BRMS1 transcriptional repressor and anoikis regulator. (272 aa)
hdac8Histone deacetylase 8; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. (411 aa)
LOC113122610Histone deacetylase 12. (344 aa)
ENSMAMP00000019454Uncharacterized protein. (128 aa)
restRE1-silencing transcription factor. (972 aa)
LOC113137822SIN3 transcription regulator family member Ab. (1292 aa)
ing1Inhibitor of growth protein. (304 aa)
LOC113130068Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. (952 aa)
ENSMAMP00000025634Translocase of outer mitochondrial membrane 20. (1214 aa)
wdr73WD repeat domain 73. (380 aa)
rcor3REST corepressor 3. (553 aa)
sap30lSap30-like. (178 aa)
hdac10Histone deacetylase 10. (683 aa)
Your Current Organism:
Mastacembelus armatus
NCBI taxonomy Id: 205130
Other names: M. armatus, Macrognathus armatus, zig-zag eel
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