31 items (Mastacembelus armatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	scfd2	Sec1 family domain containing 2; Belongs to the STXBP/unc-18/SEC1 family. (691 aa)
	exoc2	Exocyst complex component 2; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family. (922 aa)
	ENSMAMP00000020576	VPS18 core subunit of CORVET and HOPS complexes. (970 aa)
	rabepk	Rab9 effector protein with kelch motifs. (351 aa)
	stxbp3	Syntaxin binding protein 3; Belongs to the STXBP/unc-18/SEC1 family. (593 aa)
	exoc4	Exocyst complex component 4. (981 aa)
	rab3d	RAB3D, member RAS oncogene family, b. (222 aa)
	ENSMAMP00000014085	Uncharacterized protein. (1467 aa)
	rab8b	Multiple EGF-like-domains 8. (207 aa)
	ENSMAMP00000010256	Uncharacterized protein. (85 aa)
	RAB15	RAB15, member RAS oncogene family. (212 aa)
	rab3c	RAB3C, member RAS oncogene family. (225 aa)
	rab3a	RAB3A, member RAS oncogene family, b. (219 aa)
	LOC113134029	RAB3A, member RAS oncogene family. (219 aa)
	rab12	RAB12, member RAS oncogene family. (242 aa)
	rab10	RAB10, member RAS oncogene family. (201 aa)
	vps11	Vacuolar protein sorting-associated protein 11 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS11 family. (926 aa)
	UNC13C	Unc-13 homolog C. (2153 aa)
	rab15	RAB15, member RAS oncogene family. (213 aa)
	LOC113124335	Syntaxin binding protein 1a; Belongs to the STXBP/unc-18/SEC1 family. (603 aa)
	UNC13B	Unc-13 homolog B. (1574 aa)
	RAB8A	RAB8A, member RAS oncogene family. (206 aa)
	plek	Pleckstrin. (352 aa)
	stxbp2	Syntaxin binding protein 2; Belongs to the STXBP/unc-18/SEC1 family. (593 aa)
	UNC13A	Unc-13 homolog A. (1549 aa)
	ENSMAMP00000026918	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (603 aa)
	LOC113140021	RAB3B, member RAS oncogene family. (217 aa)
	ENSMAMP00000024000	Uncharacterized protein. (1533 aa)
	rab13	RAB13, member RAS oncogene family. (237 aa)
	LOC113127984	Uncharacterized protein. (278 aa)
	LOC113133899	RAB8A, member RAS oncogene family. (206 aa)

Your Current Organism:

Mastacembelus armatus

NCBI taxonomy Id: 205130
Other names: M. armatus, Macrognathus armatus, zig-zag eel

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSMAMP00000010256	ENSMAMP00000026918	ENSMAMP00000010256	ENSMAMP00000026918	Uncharacterized protein.	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.	0.435
ENSMAMP00000010256	LOC113124335	ENSMAMP00000010256	ENSMAMP00000003964	Uncharacterized protein.	Syntaxin binding protein 1a; Belongs to the STXBP/unc-18/SEC1 family.	0.435
ENSMAMP00000010256	LOC113127984	ENSMAMP00000010256	ENSMAMP00000003511	Uncharacterized protein.	Uncharacterized protein.	0.465
ENSMAMP00000010256	LOC113134029	ENSMAMP00000010256	ENSMAMP00000009148	Uncharacterized protein.	RAB3A, member RAS oncogene family.	0.465
ENSMAMP00000010256	LOC113140021	ENSMAMP00000010256	ENSMAMP00000024010	Uncharacterized protein.	RAB3B, member RAS oncogene family.	0.465
ENSMAMP00000010256	exoc2	ENSMAMP00000010256	ENSMAMP00000020601	Uncharacterized protein.	Exocyst complex component 2; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family.	0.789
ENSMAMP00000010256	exoc4	ENSMAMP00000010256	ENSMAMP00000016044	Uncharacterized protein.	Exocyst complex component 4.	0.827
ENSMAMP00000010256	rab3a	ENSMAMP00000010256	ENSMAMP00000009112	Uncharacterized protein.	RAB3A, member RAS oncogene family, b.	0.465
ENSMAMP00000010256	rab3c	ENSMAMP00000010256	ENSMAMP00000000648	Uncharacterized protein.	RAB3C, member RAS oncogene family.	0.465
ENSMAMP00000010256	rab3d	ENSMAMP00000010256	ENSMAMP00000016026	Uncharacterized protein.	RAB3D, member RAS oncogene family, b.	0.465
ENSMAMP00000010256	stxbp2	ENSMAMP00000010256	ENSMAMP00000030144	Uncharacterized protein.	Syntaxin binding protein 2; Belongs to the STXBP/unc-18/SEC1 family.	0.435
ENSMAMP00000010256	stxbp3	ENSMAMP00000010256	ENSMAMP00000018220	Uncharacterized protein.	Syntaxin binding protein 3; Belongs to the STXBP/unc-18/SEC1 family.	0.458
ENSMAMP00000014085	ENSMAMP00000026918	ENSMAMP00000014085	ENSMAMP00000026918	Uncharacterized protein.	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.	0.695
ENSMAMP00000014085	LOC113124335	ENSMAMP00000014085	ENSMAMP00000003964	Uncharacterized protein.	Syntaxin binding protein 1a; Belongs to the STXBP/unc-18/SEC1 family.	0.704
ENSMAMP00000014085	LOC113127984	ENSMAMP00000014085	ENSMAMP00000003511	Uncharacterized protein.	Uncharacterized protein.	0.559
ENSMAMP00000014085	LOC113134029	ENSMAMP00000014085	ENSMAMP00000009148	Uncharacterized protein.	RAB3A, member RAS oncogene family.	0.559
ENSMAMP00000014085	LOC113140021	ENSMAMP00000014085	ENSMAMP00000024010	Uncharacterized protein.	RAB3B, member RAS oncogene family.	0.559
ENSMAMP00000014085	rab3a	ENSMAMP00000014085	ENSMAMP00000009112	Uncharacterized protein.	RAB3A, member RAS oncogene family, b.	0.559
ENSMAMP00000014085	rab3c	ENSMAMP00000014085	ENSMAMP00000000648	Uncharacterized protein.	RAB3C, member RAS oncogene family.	0.559
ENSMAMP00000014085	rab3d	ENSMAMP00000014085	ENSMAMP00000016026	Uncharacterized protein.	RAB3D, member RAS oncogene family, b.	0.559