51 items (Mastacembelus armatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RAB29	RAB29, member RAS oncogene family. (205 aa)
	RAB31	RAB31, member RAS oncogene family. (194 aa)
	ENSMAMP00000008933	Uncharacterized protein. (219 aa)
	rab22a	RAB22A, member RAS oncogene family. (204 aa)
	srp54	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily. (504 aa)
	trim23	Tripartite motif containing 23. (580 aa)
	ENSMAMP00000006141	Uncharacterized protein. (371 aa)
	rras	RAS related. (197 aa)
	ENSMAMP00000005485	Uncharacterized protein. (111 aa)
	ARL3	ADP ribosylation factor like GTPase 3; Belongs to the small GTPase superfamily. Arf family. (192 aa)
	LOC113139146	DIRAS family, GTP-binding RAS-like 1b. (198 aa)
	RERG	RAS like estrogen regulated growth inhibitor. (235 aa)
	LOC113145316	RAP1A, member of RAS oncogene family a. (185 aa)
	ENSMAMP00000000700	RAS-like, family 12. (249 aa)
	ENSMAMP00000031892	RAP2C, member of RAS oncogene family. (195 aa)
	rras2	RAS related 2. (202 aa)
	LOC113127394	RAP2A, member of RAS oncogene family b. (183 aa)
	rab5c	RAB5C, member RAS oncogene family. (220 aa)
	LOC113127156	Uncharacterized protein. (215 aa)
	RAB17	RAB17, member RAS oncogene family. (227 aa)
	RAB27B	RAB27B, member RAS oncogene family. (218 aa)
	LOC113121375	V-ral simian leukemia viral oncogene homolog Aa (ras related). (279 aa)
	LOC113136452	RAB5A, member RAS oncogene family, b. (216 aa)
	ENSMAMP00000016706	Uncharacterized protein. (162 aa)
	LOC113123317	RAB5B, member RAS oncogene family. (216 aa)
	RAP2A	RAP2A, member of RAS oncogene family. (183 aa)
	LOC113126168	RAB5A, member RAS oncogene family, a. (216 aa)
	rab14	RAB14, member RAS oncogene family. (215 aa)
	LOC113124189	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (182 aa)
	RAP2B	RAP2B, member of RAS oncogene family. (134 aa)
	ARF6	ADP ribosylation factor 6. (113 aa)
	RAB9A	RAB9A, member RAS oncogene family. (202 aa)
	mras	Muscle RAS oncogene homolog. (208 aa)
	LOC113141876	Uncharacterized protein. (354 aa)
	LOC113123341	V-ral simian leukemia viral oncogene homolog Ba (ras related). (222 aa)
	DIRAS1	DIRAS family GTPase 1. (199 aa)
	LOC113135712	Uncharacterized protein. (220 aa)
	TMEM19	Transmembrane protein 19. (383 aa)
	rab21	RAB21, member RAS oncogene family. (220 aa)
	LOC113138850	Uncharacterized protein. (215 aa)
	RAB28	RAB28, member RAS oncogene family. (295 aa)
	rap1b	Uncharacterized protein. (244 aa)
	LOC113140753	Si:dkey-16l2.16. (220 aa)
	ENSMAMP00000029989	RAB35, member RAS oncogene family b. (184 aa)
	rab27a	RAB27A, member RAS oncogene family. (219 aa)
	rab12	RAB12, member RAS oncogene family. (242 aa)
	LOC113132429	Uncharacterized protein. (354 aa)
	rragc	Ras-related GTP binding Ca. (382 aa)
	arl2	ADP-ribosylation factor-like 2; Belongs to the small GTPase superfamily. Arf family. (184 aa)
	LOC113129836	Uncharacterized protein. (212 aa)
	ENSMAMP00000014635	RAB9B, member RAS oncogene family. (205 aa)

Your Current Organism:

Mastacembelus armatus

NCBI taxonomy Id: 205130
Other names: M. armatus, Macrognathus armatus, zig-zag eel

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARF6	ENSMAMP00000014635	ENSMAMP00000019733	ENSMAMP00000014635	ADP ribosylation factor 6.	RAB9B, member RAS oncogene family.	0.424
ARF6	ENSMAMP00000029989	ENSMAMP00000019733	ENSMAMP00000029989	ADP ribosylation factor 6.	RAB35, member RAS oncogene family b.	0.457
ARF6	LOC113132429	ENSMAMP00000019733	ENSMAMP00000010937	ADP ribosylation factor 6.	Uncharacterized protein.	0.439
ARF6	LOC113140753	ENSMAMP00000019733	ENSMAMP00000028585	ADP ribosylation factor 6.	Si:dkey-16l2.16.	0.457
ARF6	LOC113141876	ENSMAMP00000019733	ENSMAMP00000021111	ADP ribosylation factor 6.	Uncharacterized protein.	0.439
ARF6	RAB28	ENSMAMP00000019733	ENSMAMP00000028262	ADP ribosylation factor 6.	RAB28, member RAS oncogene family.	0.416
ARF6	RAB31	ENSMAMP00000019733	ENSMAMP00000009689	ADP ribosylation factor 6.	RAB31, member RAS oncogene family.	0.448
ARF6	RAB9A	ENSMAMP00000019733	ENSMAMP00000020122	ADP ribosylation factor 6.	RAB9A, member RAS oncogene family.	0.424
ARF6	arl2	ENSMAMP00000019733	ENSMAMP00000012708	ADP ribosylation factor 6.	ADP-ribosylation factor-like 2; Belongs to the small GTPase superfamily. Arf family.	0.801
ARF6	rab12	ENSMAMP00000019733	ENSMAMP00000010201	ADP ribosylation factor 6.	RAB12, member RAS oncogene family.	0.404
ARF6	rab21	ENSMAMP00000019733	ENSMAMP00000027401	ADP ribosylation factor 6.	RAB21, member RAS oncogene family.	0.465
ARF6	rab22a	ENSMAMP00000019733	ENSMAMP00000008911	ADP ribosylation factor 6.	RAB22A, member RAS oncogene family.	0.448
ARF6	trim23	ENSMAMP00000019733	ENSMAMP00000006727	ADP ribosylation factor 6.	Tripartite motif containing 23.	0.883
ARL3	LOC113132429	ENSMAMP00000003954	ENSMAMP00000010937	ADP ribosylation factor like GTPase 3; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein.	0.445
ARL3	LOC113141876	ENSMAMP00000003954	ENSMAMP00000021111	ADP ribosylation factor like GTPase 3; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein.	0.445
ARL3	RAB28	ENSMAMP00000003954	ENSMAMP00000028262	ADP ribosylation factor like GTPase 3; Belongs to the small GTPase superfamily. Arf family.	RAB28, member RAS oncogene family.	0.572
ARL3	arl2	ENSMAMP00000003954	ENSMAMP00000012708	ADP ribosylation factor like GTPase 3; Belongs to the small GTPase superfamily. Arf family.	ADP-ribosylation factor-like 2; Belongs to the small GTPase superfamily. Arf family.	0.451
ARL3	rab12	ENSMAMP00000003954	ENSMAMP00000010201	ADP ribosylation factor like GTPase 3; Belongs to the small GTPase superfamily. Arf family.	RAB12, member RAS oncogene family.	0.413
DIRAS1	ENSMAMP00000006141	ENSMAMP00000024029	ENSMAMP00000006141	DIRAS family GTPase 1.	Uncharacterized protein.	0.403
DIRAS1	LOC113121375	ENSMAMP00000024029	ENSMAMP00000016412	DIRAS family GTPase 1.	V-ral simian leukemia viral oncogene homolog Aa (ras related).	0.458