(35 nodes) Semaphorin receptor binding network (Mastacembelus armatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SEMA4D	Semaphorin 4D; Belongs to the semaphorin family. (860 aa)
	sema3c	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C; Belongs to the semaphorin family. (764 aa)
	sema3b	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B; Belongs to the semaphorin family. (806 aa)
	sema3g	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3bl; Belongs to the semaphorin family. (785 aa)
	ENSMAMP00000025434	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa; Belongs to the semaphorin family. (706 aa)
	LOC113136144	Uncharacterized protein; Belongs to the semaphorin family. (787 aa)
	LOC113129402	Si:ch211-129c21.1; Belongs to the semaphorin family. (807 aa)
	SEMA6A	Semaphorin 6A; Belongs to the semaphorin family. (927 aa)
	sema6b	Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6Bb; Belongs to the semaphorin family. (871 aa)
	LOC113122125	Sema domain-containing protein; Belongs to the semaphorin family. (836 aa)
	LOC113135167	SH3-domain binding protein 1. (708 aa)
	ENSMAMP00000007032	Uncharacterized protein; Belongs to the semaphorin family. (840 aa)
	LOC113122494	Uncharacterized protein; Belongs to the semaphorin family. (626 aa)
	sema7a	Semaphorin 7A; Belongs to the semaphorin family. (651 aa)
	sema3e	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E; Belongs to the semaphorin family. (792 aa)
	SEMA4F	Ssemaphorin 4F; Belongs to the semaphorin family. (853 aa)
	ENSMAMP00000013030	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Ab; Belongs to the semaphorin family. (743 aa)
	sema5b	Sema domain-containing protein. (1128 aa)
	ENSMAMP00000013497	Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6Ba; Belongs to the semaphorin family. (883 aa)
	sema3d	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D; Belongs to the semaphorin family. (805 aa)
	LOC113133093	Sema domain-containing protein; Belongs to the semaphorin family. (836 aa)
	ENSMAMP00000034812	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fb; Belongs to the semaphorin family. (686 aa)
	sema5a	Sema domain-containing protein. (1078 aa)
	LOC113126134	Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D; Belongs to the semaphorin family. (1150 aa)
	LOC113132168	Uncharacterized protein; Belongs to the semaphorin family. (911 aa)
	LOC113127476	Sema domain-containing protein. (1091 aa)
	sema4c	Uncharacterized protein; Belongs to the semaphorin family. (868 aa)
	LOC113126712	Sema domain-containing protein; Belongs to the semaphorin family. (821 aa)
	LOC113130300	Si:dkey-49n23.1; Belongs to the semaphorin family. (821 aa)
	LOC113134048	Semaphorin 4e; Belongs to the semaphorin family. (770 aa)
	sema6d	Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D, like; Belongs to the semaphorin family. (1110 aa)
	LOC113141837	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Aa; Belongs to the semaphorin family. (914 aa)
	LOC113136319	Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6E; Belongs to the semaphorin family. (1087 aa)
	LOC113136312	Si:ch211-113g11.6; Belongs to the semaphorin family. (639 aa)
	ENSMAMP00000018928	Uncharacterized protein; Belongs to the semaphorin family. (662 aa)

Your Current Organism:

Mastacembelus armatus

NCBI taxonomy Id: 205130
Other names: M. armatus, Macrognathus armatus, zig-zag eel

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSMAMP00000007032	ENSMAMP00000018928	ENSMAMP00000007032	ENSMAMP00000018928	Uncharacterized protein; Belongs to the semaphorin family.	Uncharacterized protein; Belongs to the semaphorin family.	0.495
ENSMAMP00000007032	LOC113122125	ENSMAMP00000007032	ENSMAMP00000001729	Uncharacterized protein; Belongs to the semaphorin family.	Sema domain-containing protein; Belongs to the semaphorin family.	0.504
ENSMAMP00000007032	LOC113126712	ENSMAMP00000007032	ENSMAMP00000030209	Uncharacterized protein; Belongs to the semaphorin family.	Sema domain-containing protein; Belongs to the semaphorin family.	0.504
ENSMAMP00000007032	LOC113129402	ENSMAMP00000007032	ENSMAMP00000027406	Uncharacterized protein; Belongs to the semaphorin family.	Si:ch211-129c21.1; Belongs to the semaphorin family.	0.495
ENSMAMP00000007032	LOC113133093	ENSMAMP00000007032	ENSMAMP00000013038	Uncharacterized protein; Belongs to the semaphorin family.	Sema domain-containing protein; Belongs to the semaphorin family.	0.504
ENSMAMP00000007032	LOC113134048	ENSMAMP00000007032	ENSMAMP00000013709	Uncharacterized protein; Belongs to the semaphorin family.	Semaphorin 4e; Belongs to the semaphorin family.	0.495
ENSMAMP00000007032	LOC113136144	ENSMAMP00000007032	ENSMAMP00000026250	Uncharacterized protein; Belongs to the semaphorin family.	Uncharacterized protein; Belongs to the semaphorin family.	0.504
ENSMAMP00000007032	SEMA4D	ENSMAMP00000007032	ENSMAMP00000021578	Uncharacterized protein; Belongs to the semaphorin family.	Semaphorin 4D; Belongs to the semaphorin family.	0.495
ENSMAMP00000013030	SEMA4D	ENSMAMP00000013030	ENSMAMP00000021578	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Ab; Belongs to the semaphorin family.	Semaphorin 4D; Belongs to the semaphorin family.	0.425
ENSMAMP00000018928	ENSMAMP00000007032	ENSMAMP00000018928	ENSMAMP00000007032	Uncharacterized protein; Belongs to the semaphorin family.	Uncharacterized protein; Belongs to the semaphorin family.	0.495
ENSMAMP00000018928	LOC113132168	ENSMAMP00000018928	ENSMAMP00000032101	Uncharacterized protein; Belongs to the semaphorin family.	Uncharacterized protein; Belongs to the semaphorin family.	0.495
ENSMAMP00000018928	LOC113141837	ENSMAMP00000018928	ENSMAMP00000016892	Uncharacterized protein; Belongs to the semaphorin family.	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Aa; Belongs to the semaphorin family.	0.408
ENSMAMP00000018928	SEMA4F	ENSMAMP00000018928	ENSMAMP00000012054	Uncharacterized protein; Belongs to the semaphorin family.	Ssemaphorin 4F; Belongs to the semaphorin family.	0.495
ENSMAMP00000018928	sema3b	ENSMAMP00000018928	ENSMAMP00000024895	Uncharacterized protein; Belongs to the semaphorin family.	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B; Belongs to the semaphorin family.	0.408
ENSMAMP00000018928	sema4c	ENSMAMP00000018928	ENSMAMP00000030805	Uncharacterized protein; Belongs to the semaphorin family.	Uncharacterized protein; Belongs to the semaphorin family.	0.495
LOC113122125	ENSMAMP00000007032	ENSMAMP00000001729	ENSMAMP00000007032	Sema domain-containing protein; Belongs to the semaphorin family.	Uncharacterized protein; Belongs to the semaphorin family.	0.504
LOC113122125	LOC113132168	ENSMAMP00000001729	ENSMAMP00000032101	Sema domain-containing protein; Belongs to the semaphorin family.	Uncharacterized protein; Belongs to the semaphorin family.	0.504
LOC113122125	SEMA4F	ENSMAMP00000001729	ENSMAMP00000012054	Sema domain-containing protein; Belongs to the semaphorin family.	Ssemaphorin 4F; Belongs to the semaphorin family.	0.504
LOC113122125	sema4c	ENSMAMP00000001729	ENSMAMP00000030805	Sema domain-containing protein; Belongs to the semaphorin family.	Uncharacterized protein; Belongs to the semaphorin family.	0.504
LOC113126134	SEMA4D	ENSMAMP00000032828	ENSMAMP00000021578	Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D; Belongs to the semaphorin family.	Semaphorin 4D; Belongs to the semaphorin family.	0.414