21 items (Mastacembelus armatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	rab3a	RAB3A, member RAS oncogene family, b. (219 aa)
	LOC113134029	RAB3A, member RAS oncogene family. (219 aa)
	rab3c	RAB3C, member RAS oncogene family. (225 aa)
	RAB38	RAB38, member RAS oncogene family. (212 aa)
	ENSMAMP00000015093	Rap guanine nucleotide exchange factor (GEF) 5a. (645 aa)
	rab3d	RAB3D, member RAS oncogene family, b. (222 aa)
	LOC113132393	Par-6 family cell polarity regulator alpha. (422 aa)
	LOC113144192	Zgc:162171. (226 aa)
	LOC113142731	RAB38b, member of RAS oncogene family. (218 aa)
	mras	Muscle RAS oncogene homolog. (208 aa)
	RAPGEF5	Uncharacterized protein. (593 aa)
	LOC113140021	RAB3B, member RAS oncogene family. (217 aa)
	rab32	RAB32a, member RAS oncogene family. (213 aa)
	ENSMAMP00000031673	RAB38c, member of RAS oncogene family. (216 aa)
	ENSMAMP00000032194	Rap guanine nucleotide exchange factor (GEF) 6. (1690 aa)
	AP3B2	AP-3 complex subunit beta. (996 aa)
	LOC113129229	RAB32b, member RAS oncogene family. (218 aa)
	LOC113127984	Uncharacterized protein. (278 aa)
	ap3b1	AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family. (1110 aa)
	HPS6	HPS6 biogenesis of lysosomal organelles complex 2 subunit 3. (839 aa)
	eea1	Early endosome antigen 1. (1416 aa)

Your Current Organism:

Mastacembelus armatus

NCBI taxonomy Id: 205130
Other names: M. armatus, Macrognathus armatus, zig-zag eel

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AP3B2	ap3b1	ENSMAMP00000034355	ENSMAMP00000006013	AP-3 complex subunit beta.	AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family.	0.895
AP3B2	mras	ENSMAMP00000034355	ENSMAMP00000020373	AP-3 complex subunit beta.	Muscle RAS oncogene homolog.	0.402
ENSMAMP00000015093	mras	ENSMAMP00000015093	ENSMAMP00000020373	Rap guanine nucleotide exchange factor (GEF) 5a.	Muscle RAS oncogene homolog.	0.908
ENSMAMP00000032194	mras	ENSMAMP00000032194	ENSMAMP00000020373	Rap guanine nucleotide exchange factor (GEF) 6.	Muscle RAS oncogene homolog.	0.799
LOC113132393	mras	ENSMAMP00000016267	ENSMAMP00000020373	Par-6 family cell polarity regulator alpha.	Muscle RAS oncogene homolog.	0.496
RAPGEF5	mras	ENSMAMP00000021643	ENSMAMP00000020373	Uncharacterized protein.	Muscle RAS oncogene homolog.	0.908
ap3b1	AP3B2	ENSMAMP00000006013	ENSMAMP00000034355	AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family.	AP-3 complex subunit beta.	0.895
ap3b1	mras	ENSMAMP00000006013	ENSMAMP00000020373	AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family.	Muscle RAS oncogene homolog.	0.402
mras	AP3B2	ENSMAMP00000020373	ENSMAMP00000034355	Muscle RAS oncogene homolog.	AP-3 complex subunit beta.	0.402
mras	ENSMAMP00000015093	ENSMAMP00000020373	ENSMAMP00000015093	Muscle RAS oncogene homolog.	Rap guanine nucleotide exchange factor (GEF) 5a.	0.908
mras	ENSMAMP00000032194	ENSMAMP00000020373	ENSMAMP00000032194	Muscle RAS oncogene homolog.	Rap guanine nucleotide exchange factor (GEF) 6.	0.799
mras	LOC113132393	ENSMAMP00000020373	ENSMAMP00000016267	Muscle RAS oncogene homolog.	Par-6 family cell polarity regulator alpha.	0.496
mras	RAPGEF5	ENSMAMP00000020373	ENSMAMP00000021643	Muscle RAS oncogene homolog.	Uncharacterized protein.	0.908
mras	ap3b1	ENSMAMP00000020373	ENSMAMP00000006013	Muscle RAS oncogene homolog.	AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family.	0.402