(16 nodes) Axon regeneration network (Mastacembelus armatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSMAMP00000028055	JunE proto-oncogene, AP-1 transcription factor subunit. (338 aa)
	LOC113139330	Tenascin C. (1817 aa)
	mtr	Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. (1299 aa)
	lamb1	Laminin, beta 1a. (1799 aa)
	ENSMAMP00000025190	Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family. (296 aa)
	ENSMAMP00000002581	Apolipoprotein Da, duplicate 1; Belongs to the calycin superfamily. Lipocalin family. (191 aa)
	ENSMAMP00000004426	Uncharacterized protein. (89 aa)
	LOC113124411	Zmp:0000000846. (2001 aa)
	ENSMAMP00000015772	Chondroitin sulfate proteoglycan 5b. (473 aa)
	LOC113121706	Apolipoprotein Db; Belongs to the calycin superfamily. Lipocalin family. (183 aa)
	cspg5	Chondroitin sulfate proteoglycan 5a. (622 aa)
	ENSMAMP00000018014	Tenascin R (restrictin, janusin). (1262 aa)
	neurog1	Neurogenin 1. (208 aa)
	ENSMAMP00000024185	Achaete-scute family bHLH transcription factor 1a. (181 aa)
	ENSMAMP00000025385	Laminin, beta 2 (laminin S). (1759 aa)
	ENSMAMP00000026348	MYC binding protein 2. (4633 aa)

Your Current Organism:

Mastacembelus armatus

NCBI taxonomy Id: 205130
Other names: M. armatus, Macrognathus armatus, zig-zag eel

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSMAMP00000018014	LOC113124411	ENSMAMP00000018014	ENSMAMP00000005064	Tenascin R (restrictin, janusin).	Zmp:0000000846.	0.829
ENSMAMP00000018014	LOC113139330	ENSMAMP00000018014	ENSMAMP00000029299	Tenascin R (restrictin, janusin).	Tenascin C.	0.839
ENSMAMP00000024185	neurog1	ENSMAMP00000024185	ENSMAMP00000020610	Achaete-scute family bHLH transcription factor 1a.	Neurogenin 1.	0.581
LOC113124411	ENSMAMP00000018014	ENSMAMP00000005064	ENSMAMP00000018014	Zmp:0000000846.	Tenascin R (restrictin, janusin).	0.829
LOC113124411	LOC113139330	ENSMAMP00000005064	ENSMAMP00000029299	Zmp:0000000846.	Tenascin C.	0.739
LOC113139330	ENSMAMP00000018014	ENSMAMP00000029299	ENSMAMP00000018014	Tenascin C.	Tenascin R (restrictin, janusin).	0.839
LOC113139330	LOC113124411	ENSMAMP00000029299	ENSMAMP00000005064	Tenascin C.	Zmp:0000000846.	0.739
neurog1	ENSMAMP00000024185	ENSMAMP00000020610	ENSMAMP00000024185	Neurogenin 1.	Achaete-scute family bHLH transcription factor 1a.	0.581