STRINGSTRING
sorl1 sorl1 RAB27B RAB27B abcb6 abcb6 LOC113143136 LOC113143136 rab27a rab27a hgs hgs NSG1 NSG1 ENSMAMP00000008933 ENSMAMP00000008933 cd63 cd63
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
sorl1Sortilin-related receptor, L(DLR class) A repeats containing. (2163 aa)
RAB27BRAB27B, member RAS oncogene family. (218 aa)
abcb6ATP-binding cassette, sub-family B (MDR/TAP), member 6a. (852 aa)
LOC113143136Neuronal vesicle trafficking associated 2. (188 aa)
rab27aRAB27A, member RAS oncogene family. (219 aa)
hgsHepatocyte growth factor-regulated tyrosine kinase substrate. (770 aa)
NSG1Neuronal vesicle trafficking associated 1. (185 aa)
ENSMAMP00000008933Uncharacterized protein. (219 aa)
cd63Tetraspanin. (239 aa)
Your Current Organism:
Mastacembelus armatus
NCBI taxonomy Id: 205130
Other names: M. armatus, Macrognathus armatus, zig-zag eel
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