(13 nodes) Macrophage chemotaxis network (Mastacembelus armatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC113126449	Endothelin 2. (161 aa)
	LOC113136842	Chemokine (C-X-C motif) receptor 3, tandem duplicate 2; Belongs to the G-protein coupled receptor 1 family. (377 aa)
	ENSMAMP00000007947	Si:dkey-238f9.1. (138 aa)
	lgals3	Galectin. (272 aa)
	ENSMAMP00000011503	TAFA chemokine like family member 3. (161 aa)
	LOC113137356	Galectin. (343 aa)
	LOC113123396	Endothelin receptor type Bb; Belongs to the G-protein coupled receptor 1 family. (429 aa)
	trim33	Tripartite motif containing 33. (1204 aa)
	LOC113144274	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (415 aa)
	LOC113134988	Endothelin receptor Ba; Belongs to the G-protein coupled receptor 1 family. (419 aa)
	TAFA4	TAFA chemokine like family member 4. (148 aa)
	LOC113125659	Galectin. (368 aa)
	CKLF	Chemokine like factor. (140 aa)

Your Current Organism:

Mastacembelus armatus

NCBI taxonomy Id: 205130
Other names: M. armatus, Macrognathus armatus, zig-zag eel

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC113123396	LOC113126449	ENSMAMP00000019379	ENSMAMP00000003694	Endothelin receptor type Bb; Belongs to the G-protein coupled receptor 1 family.	Endothelin 2.	0.885
LOC113123396	LOC113144274	ENSMAMP00000019379	ENSMAMP00000022024	Endothelin receptor type Bb; Belongs to the G-protein coupled receptor 1 family.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.830
LOC113126449	LOC113123396	ENSMAMP00000003694	ENSMAMP00000019379	Endothelin 2.	Endothelin receptor type Bb; Belongs to the G-protein coupled receptor 1 family.	0.885
LOC113126449	LOC113134988	ENSMAMP00000003694	ENSMAMP00000026383	Endothelin 2.	Endothelin receptor Ba; Belongs to the G-protein coupled receptor 1 family.	0.885
LOC113126449	LOC113144274	ENSMAMP00000003694	ENSMAMP00000022024	Endothelin 2.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.894
LOC113134988	LOC113126449	ENSMAMP00000026383	ENSMAMP00000003694	Endothelin receptor Ba; Belongs to the G-protein coupled receptor 1 family.	Endothelin 2.	0.885
LOC113134988	LOC113144274	ENSMAMP00000026383	ENSMAMP00000022024	Endothelin receptor Ba; Belongs to the G-protein coupled receptor 1 family.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.829
LOC113144274	LOC113123396	ENSMAMP00000022024	ENSMAMP00000019379	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Endothelin receptor type Bb; Belongs to the G-protein coupled receptor 1 family.	0.830
LOC113144274	LOC113126449	ENSMAMP00000022024	ENSMAMP00000003694	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Endothelin 2.	0.894
LOC113144274	LOC113134988	ENSMAMP00000022024	ENSMAMP00000026383	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Endothelin receptor Ba; Belongs to the G-protein coupled receptor 1 family.	0.829