STRINGSTRING
sae1 sae1 cbfb cbfb ENSMAMP00000024205 ENSMAMP00000024205 adar adar ENSMAMP00000017276 ENSMAMP00000017276 ube2i ube2i kri1 kri1 ENSMAMP00000001632 ENSMAMP00000001632 LOC113128185 LOC113128185 LOC113123972 LOC113123972 LOC113128353 LOC113128353 ENSMAMP00000005459 ENSMAMP00000005459 cdk5rap3 cdk5rap3 SP3 SP3 LOC113140814 LOC113140814 LOC113129987 LOC113129987 mib1 mib1 gar1 gar1 LOC113136821 LOC113136821 sumo1 sumo1 sumo2 sumo2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
sae1SUMO1 activating enzyme subunit 1. (344 aa)
cbfbCore-binding factor subunit beta. (188 aa)
ENSMAMP00000024205BHLH domain-containing protein. (205 aa)
adarAdenosine deaminase RNA specific. (1336 aa)
ENSMAMP00000017276T-cell acute lymphocytic leukemia 1. (506 aa)
ube2iUbiquitin-conjugating enzyme E2Ib; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
kri1KRI1 homolog. (766 aa)
ENSMAMP00000001632Meis homeobox 2b. (334 aa)
LOC113128185Small ubiquitin-related modifier. (96 aa)
LOC113123972Small ubiquitin-related modifier. (95 aa)
LOC113128353BHLH domain-containing protein. (450 aa)
ENSMAMP00000005459Sp3b transcription factor. (641 aa)
cdk5rap3CDK5 regulatory subunit associated protein 3. (501 aa)
SP3Sp3a transcription factor. (699 aa)
LOC113140814UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
LOC113129987Ubiquitin-like domain-containing protein. (99 aa)
mib1Mindbomb E3 ubiquitin protein ligase 1. (1040 aa)
gar1H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (232 aa)
LOC113136821Microfibril associated protein 5. (129 aa)
sumo1Small ubiquitin-related modifier. (101 aa)
sumo2Small ubiquitin-related modifier. (95 aa)
Your Current Organism:
Mastacembelus armatus
NCBI taxonomy Id: 205130
Other names: M. armatus, Macrognathus armatus, zig-zag eel
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