19 items (Mastacembelus armatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	pole3	Polymerase (DNA directed), epsilon 3 (p17 subunit). (153 aa)
	prim2	DNA primase large subunit; Regulatory subunit of the DNA primase complex and component of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which play an essential role in the initiation of DNA synthesis. The primase subunit of the polymerase alpha complex initiates DNA synthesis by oligomerising short RNA primers on both leading and lagging strands. (540 aa)
	pole	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2295 aa)
	mad2l2	Mitotic arrest deficient 2 like 2. (225 aa)
	isca1	Iron-sulfur cluster assembly 1. (129 aa)
	pold3	Polymerase (DNA-directed), delta 3, accessory subunit. (441 aa)
	pold2	Polymerase (DNA directed), delta 2, regulatory subunit. (470 aa)
	pole2	DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. (528 aa)
	polg	Polymerase (DNA directed), gamma. (1203 aa)
	rev3l	REV3 like, DNA directed polymerase zeta catalytic subunit. (3044 aa)
	pole4	Polymerase (DNA-directed), epsilon 4, accessory subunit. (126 aa)
	pold4	Si:dkey-28b4.7. (108 aa)
	LOC113129257	SCY domain-containing protein. (124 aa)
	pola2	DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis. (602 aa)
	pold1	DNA polymerase. (1119 aa)
	prim1	DNA primase; Belongs to the eukaryotic-type primase small subunit family. (419 aa)
	pola1	DNA polymerase. (1480 aa)
	ENSMAMP00000032614	Uncharacterized protein. (336 aa)
	crcp	Calcitonin gene-related peptide-receptor component protein. (145 aa)

Your Current Organism:

Mastacembelus armatus

NCBI taxonomy Id: 205130
Other names: M. armatus, Macrognathus armatus, zig-zag eel

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC113129257	pola1	ENSMAMP00000005365	ENSMAMP00000034117	SCY domain-containing protein.	DNA polymerase.	0.940
LOC113129257	pola2	ENSMAMP00000005365	ENSMAMP00000000817	SCY domain-containing protein.	DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis.	0.766
LOC113129257	pold1	ENSMAMP00000005365	ENSMAMP00000002482	SCY domain-containing protein.	DNA polymerase.	0.933
LOC113129257	pold2	ENSMAMP00000005365	ENSMAMP00000010843	SCY domain-containing protein.	Polymerase (DNA directed), delta 2, regulatory subunit.	0.792
LOC113129257	pole	ENSMAMP00000005365	ENSMAMP00000022255	SCY domain-containing protein.	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.	0.991
LOC113129257	pole2	ENSMAMP00000005365	ENSMAMP00000009236	SCY domain-containing protein.	DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family.	0.991
LOC113129257	pole3	ENSMAMP00000005365	ENSMAMP00000026236	SCY domain-containing protein.	Polymerase (DNA directed), epsilon 3 (p17 subunit).	0.991
LOC113129257	prim1	ENSMAMP00000005365	ENSMAMP00000035959	SCY domain-containing protein.	DNA primase; Belongs to the eukaryotic-type primase small subunit family.	0.749
LOC113129257	prim2	ENSMAMP00000005365	ENSMAMP00000023053	SCY domain-containing protein.	DNA primase large subunit; Regulatory subunit of the DNA primase complex and component of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which play an essential role in the initiation of DNA synthesis. The primase subunit of the polymerase alpha complex initiates DNA synthesis by oligomerising short RNA primers on both leading and lagging strands.	0.763
LOC113129257	rev3l	ENSMAMP00000005365	ENSMAMP00000006162	SCY domain-containing protein.	REV3 like, DNA directed polymerase zeta catalytic subunit.	0.931
mad2l2	pola1	ENSMAMP00000021669	ENSMAMP00000034117	Mitotic arrest deficient 2 like 2.	DNA polymerase.	0.964
mad2l2	pold1	ENSMAMP00000021669	ENSMAMP00000002482	Mitotic arrest deficient 2 like 2.	DNA polymerase.	0.972
mad2l2	pold2	ENSMAMP00000021669	ENSMAMP00000010843	Mitotic arrest deficient 2 like 2.	Polymerase (DNA directed), delta 2, regulatory subunit.	0.969
mad2l2	pold3	ENSMAMP00000021669	ENSMAMP00000015949	Mitotic arrest deficient 2 like 2.	Polymerase (DNA-directed), delta 3, accessory subunit.	0.969
mad2l2	pole	ENSMAMP00000021669	ENSMAMP00000022255	Mitotic arrest deficient 2 like 2.	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.	0.971
mad2l2	rev3l	ENSMAMP00000021669	ENSMAMP00000006162	Mitotic arrest deficient 2 like 2.	REV3 like, DNA directed polymerase zeta catalytic subunit.	0.999
pola1	LOC113129257	ENSMAMP00000034117	ENSMAMP00000005365	DNA polymerase.	SCY domain-containing protein.	0.940
pola1	mad2l2	ENSMAMP00000034117	ENSMAMP00000021669	DNA polymerase.	Mitotic arrest deficient 2 like 2.	0.964
pola1	pola2	ENSMAMP00000034117	ENSMAMP00000000817	DNA polymerase.	DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis.	0.999
pola1	pold1	ENSMAMP00000034117	ENSMAMP00000002482	DNA polymerase.	DNA polymerase.	0.988