65 items (Mastacembelus armatus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSMAMP00000025772	Uncharacterized protein. (631 aa)
	MYBL2	Uncharacterized protein. (889 aa)
	eri1	Exoribonuclease 1. (343 aa)
	LOC113144965	CCR4-NOT transcription complex, subunit 7. (286 aa)
	toe1	Target of EGR1, exonuclease. (534 aa)
	pole	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2295 aa)
	LOC113124402	Zinc finger protein 618. (931 aa)
	LOC113139111	Uncharacterized protein. (682 aa)
	ENSMAMP00000016792	Integrase catalytic domain-containing protein. (390 aa)
	rexo4	REX4 homolog, 3'-5' exonuclease. (421 aa)
	ENSMAMP00000010131	Uncharacterized protein. (551 aa)
	ENSMAMP00000016208	Uncharacterized protein. (1221 aa)
	ENSMAMP00000014867	Integrase catalytic domain-containing protein. (313 aa)
	ENSMAMP00000028841	Exosome component 10. (878 aa)
	srbd1	S1 RNA binding domain 1. (994 aa)
	ENSMAMP00000032925	Integrase catalytic domain-containing protein. (381 aa)
	pola1	DNA polymerase. (1480 aa)
	ENSMAMP00000010143	Integrase catalytic domain-containing protein. (347 aa)
	ERI2	ERI1 exoribonuclease family member 2. (728 aa)
	rnaseh1	Ribonuclease H1; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (305 aa)
	ENSMAMP00000029680	Zgc:113436. (433 aa)
	ENSMAMP00000029884	Integrase catalytic domain-containing protein. (331 aa)
	LOC113121327	Epithelial splicing regulatory protein 2. (717 aa)
	rexo2	Small fragment nuclease. (276 aa)
	ENSMAMP00000032169	Uncharacterized protein. (676 aa)
	LOC113141171	Uncharacterized protein. (376 aa)
	cnot8	CCR4-NOT transcription complex, subunit 8. (285 aa)
	ENSMAMP00000028017	Integrase catalytic domain-containing protein. (342 aa)
	ISG20L2	Interferon stimulated exonuclease gene 20 like 2. (380 aa)
	ENSMAMP00000027347	Integrase catalytic domain-containing protein. (1082 aa)
	ENSMAMP00000027157	Uncharacterized protein. (239 aa)
	LOC113140292	BED-type domain-containing protein. (634 aa)
	ENSMAMP00000034652	Integrase catalytic domain-containing protein. (215 aa)
	LOC113132401	Interferon stimulated exonuclease gene. (351 aa)
	parn	Poly(A)-specific ribonuclease (deadenylation nuclease). (687 aa)
	rexo1	REX1, RNA exonuclease 1 homolog. (1261 aa)
	ENSMAMP00000011808	Reverse transcriptase domain-containing protein. (461 aa)
	ENSMAMP00000012412	Exonuclease 3'-5' domain containing 3. (811 aa)
	LOC113136234	Argonaute RISC component 1; Belongs to the argonaute family. (858 aa)
	ENSMAMP00000012474	Argonaute RISC catalytic component 3a; Belongs to the argonaute family. (911 aa)
	ENSMAMP00000012770	Integrase catalytic domain-containing protein. (253 aa)
	LOC113126101	Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include ago2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] (875 aa)
	prpf8	Pre-mRNA processing factor 8. (2338 aa)
	ENSMAMP00000013698	Integrase catalytic domain-containing protein. (644 aa)
	ENSMAMP00000008186	Integrase catalytic domain-containing protein. (270 aa)
	polg	Polymerase (DNA directed), gamma. (1203 aa)
	piwil1	Piwi-like RNA-mediated gene silencing 1; Belongs to the argonaute family. (831 aa)
	ENSMAMP00000007540	Reverse transcriptase domain-containing protein. (402 aa)
	rev3l	REV3 like, DNA directed polymerase zeta catalytic subunit. (3044 aa)
	LOC113126231	Protein argonaute-4; Required for RNA-mediated gene silencing (RNAi). Binds to short RNAs such as microRNAs (miRNAs) and represses the translation of mRNAs which are complementary to them. Lacks endonuclease activity and does not appear to cleave target mRNAs; Belongs to the argonaute family. Ago subfamily. (874 aa)
	ENSMAMP00000004563	Integrase catalytic domain-containing protein. (330 aa)
	pan2	PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent [...] (1205 aa)
	polq	Polymerase (DNA directed), theta. (2783 aa)
	ENSMAMP00000000694	Uncharacterized protein. (524 aa)
	exd2	Exonuclease 3'-5' domain containing 2. (644 aa)
	pold1	DNA polymerase. (1119 aa)
	ENSMAMP00000008349	Integrase catalytic domain-containing protein. (556 aa)
	ENSMAMP00000008367	Uncharacterized protein. (745 aa)
	LOC113126172	Protein argonaute-3; Required for RNA-mediated gene silencing (RNAi). Binds to short RNAs such as microRNAs (miRNAs) and represses the translation of mRNAs which are complementary to them. Lacks endonuclease activity and does not appear to cleave target mRNAs; Belongs to the argonaute family. Ago subfamily. (867 aa)
	ENSMAMP00000008744	Exonuclease domain-containing protein. (1160 aa)
	ENSMAMP00000009184	Integrase catalytic domain-containing protein. (473 aa)
	ENSMAMP00000009792	Exonuclease 3'-5' domain containing 1. (406 aa)
	ENSMAMP00000009992	Integrase catalytic domain-containing protein. (355 aa)
	LOC113128158	Uncharacterized protein. (1150 aa)
	ENSMAMP00000013888	Integrase catalytic domain-containing protein. (420 aa)

Your Current Organism:

Mastacembelus armatus

NCBI taxonomy Id: 205130
Other names: M. armatus, Macrognathus armatus, zig-zag eel

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSMAMP00000000694	MYBL2	ENSMAMP00000000694	ENSMAMP00000025400	Uncharacterized protein.	Uncharacterized protein.	0.480
ENSMAMP00000004563	MYBL2	ENSMAMP00000004563	ENSMAMP00000025400	Integrase catalytic domain-containing protein.	Uncharacterized protein.	0.533
ENSMAMP00000007540	MYBL2	ENSMAMP00000007540	ENSMAMP00000025400	Reverse transcriptase domain-containing protein.	Uncharacterized protein.	0.454
ENSMAMP00000008186	ENSMAMP00000012770	ENSMAMP00000008186	ENSMAMP00000012770	Integrase catalytic domain-containing protein.	Integrase catalytic domain-containing protein.	0.406
ENSMAMP00000008186	MYBL2	ENSMAMP00000008186	ENSMAMP00000025400	Integrase catalytic domain-containing protein.	Uncharacterized protein.	0.454
ENSMAMP00000008349	MYBL2	ENSMAMP00000008349	ENSMAMP00000025400	Integrase catalytic domain-containing protein.	Uncharacterized protein.	0.533
ENSMAMP00000008367	MYBL2	ENSMAMP00000008367	ENSMAMP00000025400	Uncharacterized protein.	Uncharacterized protein.	0.533
ENSMAMP00000008744	ENSMAMP00000028841	ENSMAMP00000008744	ENSMAMP00000028841	Exonuclease domain-containing protein.	Exosome component 10.	0.767
ENSMAMP00000008744	pan2	ENSMAMP00000008744	ENSMAMP00000002410	Exonuclease domain-containing protein.	PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent [...]	0.418
ENSMAMP00000008744	polg	ENSMAMP00000008744	ENSMAMP00000007768	Exonuclease domain-containing protein.	Polymerase (DNA directed), gamma.	0.511
ENSMAMP00000008744	polq	ENSMAMP00000008744	ENSMAMP00000001246	Exonuclease domain-containing protein.	Polymerase (DNA directed), theta.	0.514
ENSMAMP00000008744	rexo1	ENSMAMP00000008744	ENSMAMP00000010741	Exonuclease domain-containing protein.	REX1, RNA exonuclease 1 homolog.	0.858
ENSMAMP00000008744	rexo2	ENSMAMP00000008744	ENSMAMP00000031483	Exonuclease domain-containing protein.	Small fragment nuclease.	0.922
ENSMAMP00000008744	rnaseh1	ENSMAMP00000008744	ENSMAMP00000029277	Exonuclease domain-containing protein.	Ribonuclease H1; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.	0.667
ENSMAMP00000009792	ENSMAMP00000012412	ENSMAMP00000009792	ENSMAMP00000012412	Exonuclease 3'-5' domain containing 1.	Exonuclease 3'-5' domain containing 3.	0.452
ENSMAMP00000009792	exd2	ENSMAMP00000009792	ENSMAMP00000000193	Exonuclease 3'-5' domain containing 1.	Exonuclease 3'-5' domain containing 2.	0.506
ENSMAMP00000009992	MYBL2	ENSMAMP00000009992	ENSMAMP00000025400	Integrase catalytic domain-containing protein.	Uncharacterized protein.	0.454
ENSMAMP00000010131	MYBL2	ENSMAMP00000010131	ENSMAMP00000025400	Uncharacterized protein.	Uncharacterized protein.	0.454
ENSMAMP00000011808	MYBL2	ENSMAMP00000011808	ENSMAMP00000025400	Reverse transcriptase domain-containing protein.	Uncharacterized protein.	0.454
ENSMAMP00000012412	ENSMAMP00000009792	ENSMAMP00000012412	ENSMAMP00000009792	Exonuclease 3'-5' domain containing 3.	Exonuclease 3'-5' domain containing 1.	0.452