(32 nodes) EGF-like, conserved site network (Mastacembelus armatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ltbp2	Uncharacterized protein. (2075 aa)
	sned1	Sushi, nidogen and EGF-like domains 1. (1391 aa)
	VWDE	Von Willebrand factor D and EGF domains. (890 aa)
	LOC113140490	Notch receptor 3. (2472 aa)
	MEGF11	Multiple EGF like domains 11. (894 aa)
	notch1	Notch receptor 1a. (2480 aa)
	ENSMAMP00000026384	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (1217 aa)
	ENSMAMP00000026689	Slit homolog 3 (Drosophila). (1510 aa)
	ENSMAMP00000027639	Si:dkey-22o22.2; Cadherins are calcium-dependent cell adhesion proteins. (2844 aa)
	ENSMAMP00000028097	Uncharacterized protein. (1445 aa)
	LOC113140173	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (1238 aa)
	slit2	Slit homolog 2 (Drosophila). (1557 aa)
	ENSMAMP00000008183	Fibrillin 2b. (2756 aa)
	LOC113138381	Notch receptor 1b. (2517 aa)
	LOC113124355	Versican b. (1636 aa)
	ENSMAMP00000009203	Multiple EGF-like-domains 11. (1035 aa)
	DLK1	Delta like non-canonical Notch ligand 1. (400 aa)
	ENSMAMP00000004618	Slit homolog 1b (Drosophila). (1513 aa)
	ENSMAMP00000003111	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (725 aa)
	ENSMAMP00000000070	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (1216 aa)
	ENSMAMP00000029273	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (723 aa)
	LOC113144477	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (724 aa)
	ENSMAMP00000032618	Cubilin (intrinsic factor-cobalamin receptor). (3578 aa)
	ENSMAMP00000033422	Delta-like 2 homolog (Drosophila). (370 aa)
	LOC113124580	Crumbs cell polarity complex component 2a. (1433 aa)
	ENSMAMP00000033885	Multiple EGF-like-domains 10. (876 aa)
	celsr2	Cadherin, EGF LAG seven-pass G-type receptor 2; Belongs to the G-protein coupled receptor 2 family. (3042 aa)
	LOC113137284	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (1253 aa)
	LOC113129531	Notch receptor 2. (2500 aa)
	ENSMAMP00000002648	Slit homolog 1a (Drosophila). (1535 aa)
	ENSMAMP00000017275	Uncharacterized protein. (286 aa)
	ENSMAMP00000007429	Delta/notch-like EGF repeat containing. (666 aa)

Your Current Organism:

Mastacembelus armatus

NCBI taxonomy Id: 205130
Other names: M. armatus, Macrognathus armatus, zig-zag eel

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DLK1	LOC113138381	ENSMAMP00000010831	ENSMAMP00000008216	Delta like non-canonical Notch ligand 1.	Notch receptor 1b.	0.593
DLK1	notch1	ENSMAMP00000010831	ENSMAMP00000026344	Delta like non-canonical Notch ligand 1.	Notch receptor 1a.	0.593
ENSMAMP00000000070	ENSMAMP00000026384	ENSMAMP00000000070	ENSMAMP00000026384	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	0.627
ENSMAMP00000000070	LOC113129531	ENSMAMP00000000070	ENSMAMP00000000472	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	Notch receptor 2.	0.895
ENSMAMP00000000070	LOC113138381	ENSMAMP00000000070	ENSMAMP00000008216	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	Notch receptor 1b.	0.941
ENSMAMP00000000070	LOC113140173	ENSMAMP00000000070	ENSMAMP00000028553	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	0.628
ENSMAMP00000000070	LOC113140490	ENSMAMP00000000070	ENSMAMP00000019106	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	Notch receptor 3.	0.895
ENSMAMP00000000070	notch1	ENSMAMP00000000070	ENSMAMP00000026344	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	Notch receptor 1a.	0.941
ENSMAMP00000003111	LOC113129531	ENSMAMP00000003111	ENSMAMP00000000472	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	Notch receptor 2.	0.857
ENSMAMP00000003111	LOC113138381	ENSMAMP00000003111	ENSMAMP00000008216	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	Notch receptor 1b.	0.889
ENSMAMP00000003111	LOC113140490	ENSMAMP00000003111	ENSMAMP00000019106	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	Notch receptor 3.	0.857
ENSMAMP00000003111	notch1	ENSMAMP00000003111	ENSMAMP00000026344	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	Notch receptor 1a.	0.889
ENSMAMP00000007429	LOC113138381	ENSMAMP00000007429	ENSMAMP00000008216	Delta/notch-like EGF repeat containing.	Notch receptor 1b.	0.428
ENSMAMP00000007429	notch1	ENSMAMP00000007429	ENSMAMP00000026344	Delta/notch-like EGF repeat containing.	Notch receptor 1a.	0.428
ENSMAMP00000008183	LOC113138381	ENSMAMP00000008183	ENSMAMP00000008216	Fibrillin 2b.	Notch receptor 1b.	0.483
ENSMAMP00000008183	notch1	ENSMAMP00000008183	ENSMAMP00000026344	Fibrillin 2b.	Notch receptor 1a.	0.483
ENSMAMP00000017275	LOC113129531	ENSMAMP00000017275	ENSMAMP00000000472	Uncharacterized protein.	Notch receptor 2.	0.870
ENSMAMP00000017275	LOC113138381	ENSMAMP00000017275	ENSMAMP00000008216	Uncharacterized protein.	Notch receptor 1b.	0.916
ENSMAMP00000017275	LOC113140490	ENSMAMP00000017275	ENSMAMP00000019106	Uncharacterized protein.	Notch receptor 3.	0.870
ENSMAMP00000017275	notch1	ENSMAMP00000017275	ENSMAMP00000026344	Uncharacterized protein.	Notch receptor 1a.	0.916