41 items (Mastacembelus armatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	pole3	Polymerase (DNA directed), epsilon 3 (p17 subunit). (153 aa)
	rpa1	Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (600 aa)
	RPA1	Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (672 aa)
	cul4b	Cullin 4B; Belongs to the cullin family. (870 aa)
	ENSMAMP00000029947	Replication factor C subunit 1. (1137 aa)
	LOC113127185	Regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1. (529 aa)
	rps27a	Ribosomal protein S27a. (156 aa)
	ENSMAMP00000035212	ATPase family AAA domain containing 5a. (1802 aa)
	wdr48	WD repeat domain 48b. (677 aa)
	ENSMAMP00000035614	RAD18 E3 ubiquitin protein ligase. (469 aa)
	rpa3	Replication protein A3. (122 aa)
	pold1	DNA polymerase. (1119 aa)
	ENSMAMP00000003022	Uncharacterized protein. (510 aa)
	pold4	Si:dkey-28b4.7. (108 aa)
	LOC113129257	SCY domain-containing protein. (124 aa)
	pole4	Polymerase (DNA-directed), epsilon 4, accessory subunit. (126 aa)
	ENSMAMP00000005451	Cullin 4A; Belongs to the cullin family. (684 aa)
	rfc5	Replication factor C (activator 1) 5. (335 aa)
	dtl	Denticleless E3 ubiquitin protein ligase homolog (Drosophila). (657 aa)
	meiob	Methionine sulfoxide reductase B1b. (469 aa)
	pole2	DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. (528 aa)
	LOC113134865	Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
	uba52	Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
	rfc4	Replication factor C (activator 1) 4. (376 aa)
	rbx1	Ring-box 1, E3 ubiquitin protein ligase. (108 aa)
	rpa2	Replication protein A2. (272 aa)
	kxd1	KxDL motif containing 1. (184 aa)
	pold2	Polymerase (DNA directed), delta 2, regulatory subunit. (470 aa)
	ENSMAMP00000011048	Uncharacterized protein. (139 aa)
	usp1	Ubiquitin carboxyl-terminal hydrolase. (819 aa)
	pold3	Polymerase (DNA-directed), delta 3, accessory subunit. (441 aa)
	rcbtb2	Regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2. (527 aa)
	ENSMAMP00000018993	ATPase_AAA_core domain-containing protein. (157 aa)
	ENSMAMP00000019030	ATPase_AAA_core domain-containing protein. (97 aa)
	ENSMAMP00000019064	ATPase_AAA_core domain-containing protein. (146 aa)
	RFC2	Replication factor C (activator 1) 2. (359 aa)
	ddb1	Damage-specific DNA binding protein 1. (1140 aa)
	ENSMAMP00000021732	Replication factor C (activator 1) 3. (423 aa)
	pole	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2295 aa)
	pcna	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (260 aa)
	RCBTB1	RCC1 and BTB domain containing protein 1. (531 aa)

Your Current Organism:

Mastacembelus armatus

NCBI taxonomy Id: 205130
Other names: M. armatus, Macrognathus armatus, zig-zag eel

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSMAMP00000003022	ENSMAMP00000005451	ENSMAMP00000003022	ENSMAMP00000005451	Uncharacterized protein.	Cullin 4A; Belongs to the cullin family.	0.647
ENSMAMP00000003022	ENSMAMP00000011048	ENSMAMP00000003022	ENSMAMP00000011048	Uncharacterized protein.	Uncharacterized protein.	0.534
ENSMAMP00000003022	ENSMAMP00000018993	ENSMAMP00000003022	ENSMAMP00000018993	Uncharacterized protein.	ATPase_AAA_core domain-containing protein.	0.927
ENSMAMP00000003022	ENSMAMP00000019030	ENSMAMP00000003022	ENSMAMP00000019030	Uncharacterized protein.	ATPase_AAA_core domain-containing protein.	0.927
ENSMAMP00000003022	ENSMAMP00000019064	ENSMAMP00000003022	ENSMAMP00000019064	Uncharacterized protein.	ATPase_AAA_core domain-containing protein.	0.927
ENSMAMP00000003022	ENSMAMP00000021732	ENSMAMP00000003022	ENSMAMP00000021732	Uncharacterized protein.	Replication factor C (activator 1) 3.	0.993
ENSMAMP00000003022	ENSMAMP00000029947	ENSMAMP00000003022	ENSMAMP00000029947	Uncharacterized protein.	Replication factor C subunit 1.	0.537
ENSMAMP00000003022	ENSMAMP00000035614	ENSMAMP00000003022	ENSMAMP00000035614	Uncharacterized protein.	RAD18 E3 ubiquitin protein ligase.	0.849
ENSMAMP00000003022	LOC113129257	ENSMAMP00000003022	ENSMAMP00000005365	Uncharacterized protein.	SCY domain-containing protein.	0.706
ENSMAMP00000003022	RFC2	ENSMAMP00000003022	ENSMAMP00000019104	Uncharacterized protein.	Replication factor C (activator 1) 2.	0.927
ENSMAMP00000003022	RPA1	ENSMAMP00000003022	ENSMAMP00000029820	Uncharacterized protein.	Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage.	0.798
ENSMAMP00000003022	cul4b	ENSMAMP00000003022	ENSMAMP00000029885	Uncharacterized protein.	Cullin 4B; Belongs to the cullin family.	0.647
ENSMAMP00000003022	ddb1	ENSMAMP00000003022	ENSMAMP00000021470	Uncharacterized protein.	Damage-specific DNA binding protein 1.	0.646
ENSMAMP00000003022	dtl	ENSMAMP00000003022	ENSMAMP00000007659	Uncharacterized protein.	Denticleless E3 ubiquitin protein ligase homolog (Drosophila).	0.858
ENSMAMP00000003022	meiob	ENSMAMP00000003022	ENSMAMP00000009063	Uncharacterized protein.	Methionine sulfoxide reductase B1b.	0.798
ENSMAMP00000003022	pcna	ENSMAMP00000003022	ENSMAMP00000022273	Uncharacterized protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.979
ENSMAMP00000003022	pold1	ENSMAMP00000003022	ENSMAMP00000002482	Uncharacterized protein.	DNA polymerase.	0.853
ENSMAMP00000003022	pold2	ENSMAMP00000003022	ENSMAMP00000010843	Uncharacterized protein.	Polymerase (DNA directed), delta 2, regulatory subunit.	0.743
ENSMAMP00000003022	pold3	ENSMAMP00000003022	ENSMAMP00000015949	Uncharacterized protein.	Polymerase (DNA-directed), delta 3, accessory subunit.	0.794
ENSMAMP00000003022	pold4	ENSMAMP00000003022	ENSMAMP00000004686	Uncharacterized protein.	Si:dkey-28b4.7.	0.518