34 items (Mastacembelus armatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RFC2	Replication factor C (activator 1) 2. (359 aa)
	ENSMAMP00000019064	ATPase_AAA_core domain-containing protein. (146 aa)
	ENSMAMP00000019030	ATPase_AAA_core domain-containing protein. (97 aa)
	ENSMAMP00000018993	ATPase_AAA_core domain-containing protein. (157 aa)
	ENSMAMP00000035212	ATPase family AAA domain containing 5a. (1802 aa)
	rps27a	Ribosomal protein S27a. (156 aa)
	spata5l1	Spermatogenesis associated 5-like 1. (753 aa)
	rcbtb2	Regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2. (527 aa)
	nploc4	NPL4 homolog, ubiquitin recognition factor. (628 aa)
	LOC113133286	Si:dkey-24l11.2. (649 aa)
	ENSMAMP00000011048	Uncharacterized protein. (139 aa)
	kxd1	KxDL motif containing 1. (184 aa)
	rpa2	Replication protein A2. (272 aa)
	rfc4	Replication factor C (activator 1) 4. (376 aa)
	uba52	Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
	LOC113134865	Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
	meiob	Methionine sulfoxide reductase B1b. (469 aa)
	rfc5	Replication factor C (activator 1) 5. (335 aa)
	ENSMAMP00000003022	Uncharacterized protein. (510 aa)
	rpa3	Replication protein A3. (122 aa)
	LOC113127185	Regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1. (529 aa)
	ENSMAMP00000031554	SprT-like N-terminal domain. (568 aa)
	polh	Polymerase (DNA directed), eta. (734 aa)
	rchy1	Uncharacterized protein. (280 aa)
	ENSMAMP00000029947	Replication factor C subunit 1. (1137 aa)
	RPA1	Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (672 aa)
	rpa1	Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (600 aa)
	RCBTB1	RCC1 and BTB domain containing protein 1. (531 aa)
	SPATA5	Spermatogenesis associated 5. (893 aa)
	pcna	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (260 aa)
	ENSMAMP00000021732	Replication factor C (activator 1) 3. (423 aa)
	ufd1	Ubiquitin recognition factor in ER associated degradation 1. (332 aa)
	ENSMAMP00000020276	Valosin containing protein; Belongs to the AAA ATPase family. (761 aa)
	LOC113128546	Zgc:136908; Belongs to the AAA ATPase family. (808 aa)

Your Current Organism:

Mastacembelus armatus

NCBI taxonomy Id: 205130
Other names: M. armatus, Macrognathus armatus, zig-zag eel

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSMAMP00000003022	ENSMAMP00000011048	ENSMAMP00000003022	ENSMAMP00000011048	Uncharacterized protein.	Uncharacterized protein.	0.534
ENSMAMP00000003022	ENSMAMP00000018993	ENSMAMP00000003022	ENSMAMP00000018993	Uncharacterized protein.	ATPase_AAA_core domain-containing protein.	0.927
ENSMAMP00000003022	ENSMAMP00000019030	ENSMAMP00000003022	ENSMAMP00000019030	Uncharacterized protein.	ATPase_AAA_core domain-containing protein.	0.927
ENSMAMP00000003022	ENSMAMP00000019064	ENSMAMP00000003022	ENSMAMP00000019064	Uncharacterized protein.	ATPase_AAA_core domain-containing protein.	0.927
ENSMAMP00000003022	ENSMAMP00000020276	ENSMAMP00000003022	ENSMAMP00000020276	Uncharacterized protein.	Valosin containing protein; Belongs to the AAA ATPase family.	0.584
ENSMAMP00000003022	ENSMAMP00000021732	ENSMAMP00000003022	ENSMAMP00000021732	Uncharacterized protein.	Replication factor C (activator 1) 3.	0.993
ENSMAMP00000003022	ENSMAMP00000029947	ENSMAMP00000003022	ENSMAMP00000029947	Uncharacterized protein.	Replication factor C subunit 1.	0.537
ENSMAMP00000003022	ENSMAMP00000031554	ENSMAMP00000003022	ENSMAMP00000031554	Uncharacterized protein.	SprT-like N-terminal domain.	0.777
ENSMAMP00000003022	LOC113128546	ENSMAMP00000003022	ENSMAMP00000019392	Uncharacterized protein.	Zgc:136908; Belongs to the AAA ATPase family.	0.584
ENSMAMP00000003022	RFC2	ENSMAMP00000003022	ENSMAMP00000019104	Uncharacterized protein.	Replication factor C (activator 1) 2.	0.927
ENSMAMP00000003022	RPA1	ENSMAMP00000003022	ENSMAMP00000029820	Uncharacterized protein.	Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage.	0.798
ENSMAMP00000003022	SPATA5	ENSMAMP00000003022	ENSMAMP00000022524	Uncharacterized protein.	Spermatogenesis associated 5.	0.584
ENSMAMP00000003022	meiob	ENSMAMP00000003022	ENSMAMP00000009063	Uncharacterized protein.	Methionine sulfoxide reductase B1b.	0.798
ENSMAMP00000003022	pcna	ENSMAMP00000003022	ENSMAMP00000022273	Uncharacterized protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.979
ENSMAMP00000003022	polh	ENSMAMP00000003022	ENSMAMP00000031466	Uncharacterized protein.	Polymerase (DNA directed), eta.	0.728
ENSMAMP00000003022	rfc4	ENSMAMP00000003022	ENSMAMP00000010355	Uncharacterized protein.	Replication factor C (activator 1) 4.	0.990
ENSMAMP00000003022	rfc5	ENSMAMP00000003022	ENSMAMP00000006704	Uncharacterized protein.	Replication factor C (activator 1) 5.	0.990
ENSMAMP00000003022	rpa1	ENSMAMP00000003022	ENSMAMP00000026798	Uncharacterized protein.	Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage.	0.798
ENSMAMP00000003022	rpa2	ENSMAMP00000003022	ENSMAMP00000010682	Uncharacterized protein.	Replication protein A2.	0.658
ENSMAMP00000003022	rpa3	ENSMAMP00000003022	ENSMAMP00000000841	Uncharacterized protein.	Replication protein A3.	0.731