13 items (Mastacembelus armatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	tgfa	Transforming growth factor, alpha. (246 aa)
	LOC113140692	Zgc:55558. (223 aa)
	hras	HRas proto-oncogene, GTPase a. (189 aa)
	kras	V-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog. (189 aa)
	grb2	Growth factor receptor-bound protein 2b. (217 aa)
	LOC113125394	Crystallin, beta B1, like 3; Belongs to the beta/gamma-crystallin family. (209 aa)
	CSDE1	Cold shock domain containing E1, RNA-binding. (879 aa)
	SHC4	SHC adaptor protein 4. (571 aa)
	ereg	EGF-like domain-containing protein. (172 aa)
	epgn	EGF-like domain-containing protein. (196 aa)
	shc1	SHC (Src homology 2 domain containing) transforming protein 1. (453 aa)
	ENSMAMP00000024812	Betacellulin, epidermal growth factor family member. (223 aa)
	ENSMAMP00000025989	Epidermal growth factor. (993 aa)

Your Current Organism:

Mastacembelus armatus

NCBI taxonomy Id: 205130
Other names: M. armatus, Macrognathus armatus, zig-zag eel

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CSDE1	ENSMAMP00000024812	ENSMAMP00000013132	ENSMAMP00000024812	Cold shock domain containing E1, RNA-binding.	Betacellulin, epidermal growth factor family member.	0.539
CSDE1	ENSMAMP00000025989	ENSMAMP00000013132	ENSMAMP00000025989	Cold shock domain containing E1, RNA-binding.	Epidermal growth factor.	0.580
CSDE1	SHC4	ENSMAMP00000013132	ENSMAMP00000017220	Cold shock domain containing E1, RNA-binding.	SHC adaptor protein 4.	0.522
CSDE1	epgn	ENSMAMP00000013132	ENSMAMP00000017719	Cold shock domain containing E1, RNA-binding.	EGF-like domain-containing protein.	0.507
CSDE1	ereg	ENSMAMP00000013132	ENSMAMP00000017707	Cold shock domain containing E1, RNA-binding.	EGF-like domain-containing protein.	0.557
CSDE1	grb2	ENSMAMP00000013132	ENSMAMP00000012749	Cold shock domain containing E1, RNA-binding.	Growth factor receptor-bound protein 2b.	0.802
CSDE1	shc1	ENSMAMP00000013132	ENSMAMP00000020899	Cold shock domain containing E1, RNA-binding.	SHC (Src homology 2 domain containing) transforming protein 1.	0.522
CSDE1	tgfa	ENSMAMP00000013132	ENSMAMP00000035222	Cold shock domain containing E1, RNA-binding.	Transforming growth factor, alpha.	0.533
ENSMAMP00000024812	CSDE1	ENSMAMP00000024812	ENSMAMP00000013132	Betacellulin, epidermal growth factor family member.	Cold shock domain containing E1, RNA-binding.	0.539
ENSMAMP00000024812	ENSMAMP00000025989	ENSMAMP00000024812	ENSMAMP00000025989	Betacellulin, epidermal growth factor family member.	Epidermal growth factor.	0.835
ENSMAMP00000024812	LOC113140692	ENSMAMP00000024812	ENSMAMP00000002439	Betacellulin, epidermal growth factor family member.	Zgc:55558.	0.539
ENSMAMP00000024812	SHC4	ENSMAMP00000024812	ENSMAMP00000017220	Betacellulin, epidermal growth factor family member.	SHC adaptor protein 4.	0.493
ENSMAMP00000024812	epgn	ENSMAMP00000024812	ENSMAMP00000017719	Betacellulin, epidermal growth factor family member.	EGF-like domain-containing protein.	0.814
ENSMAMP00000024812	ereg	ENSMAMP00000024812	ENSMAMP00000017707	Betacellulin, epidermal growth factor family member.	EGF-like domain-containing protein.	0.819
ENSMAMP00000024812	grb2	ENSMAMP00000024812	ENSMAMP00000012749	Betacellulin, epidermal growth factor family member.	Growth factor receptor-bound protein 2b.	0.655
ENSMAMP00000024812	hras	ENSMAMP00000024812	ENSMAMP00000006398	Betacellulin, epidermal growth factor family member.	HRas proto-oncogene, GTPase a.	0.539
ENSMAMP00000024812	kras	ENSMAMP00000024812	ENSMAMP00000008246	Betacellulin, epidermal growth factor family member.	V-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog.	0.539
ENSMAMP00000024812	shc1	ENSMAMP00000024812	ENSMAMP00000020899	Betacellulin, epidermal growth factor family member.	SHC (Src homology 2 domain containing) transforming protein 1.	0.493
ENSMAMP00000024812	tgfa	ENSMAMP00000024812	ENSMAMP00000035222	Betacellulin, epidermal growth factor family member.	Transforming growth factor, alpha.	0.723
ENSMAMP00000025989	CSDE1	ENSMAMP00000025989	ENSMAMP00000013132	Epidermal growth factor.	Cold shock domain containing E1, RNA-binding.	0.580