17 items (Mastacembelus armatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC113133039	Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family. (597 aa)
	nkx2-5	NK2 homeobox 5. (302 aa)
	MME	Membrane metalloendopeptidase. (770 aa)
	ENSMAMP00000021778	Si:ch211-215j19.12; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family. (178 aa)
	LOC113132389	Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family. (592 aa)
	ENSMAMP00000007873	Guanylate cyclase. (982 aa)
	nppc	Natriuretic peptide C. (121 aa)
	npr2	Guanylate cyclase. (1054 aa)
	ENSMAMP00000009937	Guanylate cyclase. (768 aa)
	ENSMAMP00000014647	Protein kinase domain-containing protein. (584 aa)
	ENSMAMP00000015302	Corin, serine peptidase. (869 aa)
	ENSMAMP00000022764	Membrane metallo-endopeptidase-like 1. (709 aa)
	LOC113136491	Guanylate cyclase. (1069 aa)
	LOC113125870	Guanylate cyclase. (1082 aa)
	LOC113145199	Uncharacterized protein. (138 aa)
	ENSMAMP00000021219	Uncharacterized protein. (155 aa)
	phex	Phosphate regulating endopeptidase homolog, X-linked. (745 aa)

Your Current Organism:

Mastacembelus armatus

NCBI taxonomy Id: 205130
Other names: M. armatus, Macrognathus armatus, zig-zag eel

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSMAMP00000007873	ENSMAMP00000021219	ENSMAMP00000007873	ENSMAMP00000021219	Guanylate cyclase.	Uncharacterized protein.	0.921
ENSMAMP00000007873	LOC113145199	ENSMAMP00000007873	ENSMAMP00000021294	Guanylate cyclase.	Uncharacterized protein.	0.870
ENSMAMP00000007873	nppc	ENSMAMP00000007873	ENSMAMP00000003066	Guanylate cyclase.	Natriuretic peptide C.	0.909
ENSMAMP00000009937	ENSMAMP00000021219	ENSMAMP00000009937	ENSMAMP00000021219	Guanylate cyclase.	Uncharacterized protein.	0.921
ENSMAMP00000009937	LOC113145199	ENSMAMP00000009937	ENSMAMP00000021294	Guanylate cyclase.	Uncharacterized protein.	0.870
ENSMAMP00000009937	nppc	ENSMAMP00000009937	ENSMAMP00000003066	Guanylate cyclase.	Natriuretic peptide C.	0.957
ENSMAMP00000014647	ENSMAMP00000021219	ENSMAMP00000014647	ENSMAMP00000021219	Protein kinase domain-containing protein.	Uncharacterized protein.	0.921
ENSMAMP00000014647	LOC113145199	ENSMAMP00000014647	ENSMAMP00000021294	Protein kinase domain-containing protein.	Uncharacterized protein.	0.870
ENSMAMP00000014647	nppc	ENSMAMP00000014647	ENSMAMP00000003066	Protein kinase domain-containing protein.	Natriuretic peptide C.	0.957
ENSMAMP00000015302	ENSMAMP00000021219	ENSMAMP00000015302	ENSMAMP00000021219	Corin, serine peptidase.	Uncharacterized protein.	0.867
ENSMAMP00000015302	LOC113145199	ENSMAMP00000015302	ENSMAMP00000021294	Corin, serine peptidase.	Uncharacterized protein.	0.723
ENSMAMP00000021219	ENSMAMP00000007873	ENSMAMP00000021219	ENSMAMP00000007873	Uncharacterized protein.	Guanylate cyclase.	0.921
ENSMAMP00000021219	ENSMAMP00000009937	ENSMAMP00000021219	ENSMAMP00000009937	Uncharacterized protein.	Guanylate cyclase.	0.921
ENSMAMP00000021219	ENSMAMP00000014647	ENSMAMP00000021219	ENSMAMP00000014647	Uncharacterized protein.	Protein kinase domain-containing protein.	0.921
ENSMAMP00000021219	ENSMAMP00000015302	ENSMAMP00000021219	ENSMAMP00000015302	Uncharacterized protein.	Corin, serine peptidase.	0.867
ENSMAMP00000021219	ENSMAMP00000021778	ENSMAMP00000021219	ENSMAMP00000021778	Uncharacterized protein.	Si:ch211-215j19.12; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.	0.921
ENSMAMP00000021219	LOC113125870	ENSMAMP00000021219	ENSMAMP00000033014	Uncharacterized protein.	Guanylate cyclase.	0.965
ENSMAMP00000021219	LOC113136491	ENSMAMP00000021219	ENSMAMP00000027331	Uncharacterized protein.	Guanylate cyclase.	0.965
ENSMAMP00000021219	LOC113145199	ENSMAMP00000021219	ENSMAMP00000021294	Uncharacterized protein.	Uncharacterized protein.	0.967
ENSMAMP00000021219	nkx2-5	ENSMAMP00000021219	ENSMAMP00000018075	Uncharacterized protein.	NK2 homeobox 5.	0.769