19 items (Mastacembelus armatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSMAMP00000026858	CRIB domain-containing protein. (103 aa)
	LOC113125364	Non-specific serine/threonine protein kinase. (565 aa)
	PAK3	Non-specific serine/threonine protein kinase. (575 aa)
	pak2	Non-specific serine/threonine protein kinase. (530 aa)
	relb	V-rel avian reticuloendotheliosis viral oncogene homolog B. (603 aa)
	REL	REL proto-oncogene, NF-kB subunit. (649 aa)
	CSDE1	Cold shock domain containing E1, RNA-binding. (879 aa)
	ENSMAMP00000011927	C-type lectin domain-containing protein. (254 aa)
	ENSMAMP00000011905	C-type lectin domain-containing protein. (200 aa)
	kras	V-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog. (189 aa)
	LOC113129875	Tyrosine-protein kinase. (537 aa)
	hras	HRas proto-oncogene, GTPase a. (189 aa)
	fyn	Tyrosine-protein kinase. (589 aa)
	LOC113137460	V-rel avian reticuloendotheliosis viral oncogene homolog A. (633 aa)
	LOC113136601	Si:ch73-86n18.1. (255 aa)
	LOC113136611	C-type lectin domain-containing protein. (222 aa)
	PAK2	Non-specific serine/threonine protein kinase. (516 aa)
	LOC113140692	Zgc:55558. (223 aa)
	ENSMAMP00000028014	C-type lectin domain-containing protein. (306 aa)

Your Current Organism:

Mastacembelus armatus

NCBI taxonomy Id: 205130
Other names: M. armatus, Macrognathus armatus, zig-zag eel

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CSDE1	ENSMAMP00000026858	ENSMAMP00000013132	ENSMAMP00000026858	Cold shock domain containing E1, RNA-binding.	CRIB domain-containing protein.	0.577
CSDE1	LOC113125364	ENSMAMP00000013132	ENSMAMP00000026831	Cold shock domain containing E1, RNA-binding.	Non-specific serine/threonine protein kinase.	0.577
CSDE1	LOC113129875	ENSMAMP00000013132	ENSMAMP00000007950	Cold shock domain containing E1, RNA-binding.	Tyrosine-protein kinase.	0.615
CSDE1	LOC113137460	ENSMAMP00000013132	ENSMAMP00000005739	Cold shock domain containing E1, RNA-binding.	V-rel avian reticuloendotheliosis viral oncogene homolog A.	0.441
CSDE1	PAK2	ENSMAMP00000013132	ENSMAMP00000002998	Cold shock domain containing E1, RNA-binding.	Non-specific serine/threonine protein kinase.	0.577
CSDE1	PAK3	ENSMAMP00000013132	ENSMAMP00000025502	Cold shock domain containing E1, RNA-binding.	Non-specific serine/threonine protein kinase.	0.577
CSDE1	REL	ENSMAMP00000013132	ENSMAMP00000015698	Cold shock domain containing E1, RNA-binding.	REL proto-oncogene, NF-kB subunit.	0.441
CSDE1	fyn	ENSMAMP00000013132	ENSMAMP00000006034	Cold shock domain containing E1, RNA-binding.	Tyrosine-protein kinase.	0.615
CSDE1	pak2	ENSMAMP00000013132	ENSMAMP00000023749	Cold shock domain containing E1, RNA-binding.	Non-specific serine/threonine protein kinase.	0.577
CSDE1	relb	ENSMAMP00000013132	ENSMAMP00000016972	Cold shock domain containing E1, RNA-binding.	V-rel avian reticuloendotheliosis viral oncogene homolog B.	0.441
ENSMAMP00000011905	LOC113136601	ENSMAMP00000011905	ENSMAMP00000005167	C-type lectin domain-containing protein.	Si:ch73-86n18.1.	0.730
ENSMAMP00000011905	LOC113136611	ENSMAMP00000011905	ENSMAMP00000005150	C-type lectin domain-containing protein.	C-type lectin domain-containing protein.	0.744
ENSMAMP00000011927	LOC113136601	ENSMAMP00000011927	ENSMAMP00000005167	C-type lectin domain-containing protein.	Si:ch73-86n18.1.	0.730
ENSMAMP00000011927	LOC113136611	ENSMAMP00000011927	ENSMAMP00000005150	C-type lectin domain-containing protein.	C-type lectin domain-containing protein.	0.749
ENSMAMP00000026858	CSDE1	ENSMAMP00000026858	ENSMAMP00000013132	CRIB domain-containing protein.	Cold shock domain containing E1, RNA-binding.	0.577
ENSMAMP00000026858	LOC113129875	ENSMAMP00000026858	ENSMAMP00000007950	CRIB domain-containing protein.	Tyrosine-protein kinase.	0.530
ENSMAMP00000026858	LOC113140692	ENSMAMP00000026858	ENSMAMP00000002439	CRIB domain-containing protein.	Zgc:55558.	0.577
ENSMAMP00000026858	PAK2	ENSMAMP00000026858	ENSMAMP00000002998	CRIB domain-containing protein.	Non-specific serine/threonine protein kinase.	0.845
ENSMAMP00000026858	fyn	ENSMAMP00000026858	ENSMAMP00000006034	CRIB domain-containing protein.	Tyrosine-protein kinase.	0.530
ENSMAMP00000026858	hras	ENSMAMP00000026858	ENSMAMP00000006398	CRIB domain-containing protein.	HRas proto-oncogene, GTPase a.	0.577