STRINGSTRING
uba52 uba52 LOC113134865 LOC113134865 pole2 pole2 meiob meiob actb actb ube2n ube2n pias1 pias1 LOC113140814 LOC113140814 ddb2 ddb2 cops4 cops4 ENSMAMP00000006861 ENSMAMP00000006861 rfc5 rfc5 ercc4 ercc4 ercc3 ercc3 gtf2h1 gtf2h1 LOC113129987 LOC113129987 ENSMAMP00000006223 ENSMAMP00000006223 ino80e ino80e ENSMAMP00000005451 ENSMAMP00000005451 pole4 pole4 LOC113129257 LOC113129257 ENSMAMP00000005181 ENSMAMP00000005181 ercc5 ercc5 pold4 pold4 gps1 gps1 usp45 usp45 ENSMAMP00000003022 ENSMAMP00000003022 LOC113123972 LOC113123972 mnat1 mnat1 pold1 pold1 rpap3 rpap3 LOC113128185 LOC113128185 LOC113142672 LOC113142672 ENSMAMP00000001719 ENSMAMP00000001719 wdr76 wdr76 rpa3 rpa3 cops3 cops3 ruvbl1 ruvbl1 parp3 parp3 ENSMAMP00000035212 ENSMAMP00000035212 sumo2 sumo2 cops5 cops5 sumo1 sumo1 rps27a rps27a LOC113139794 LOC113139794 LOC113127185 LOC113127185 rnf111 rnf111 parp1 parp1 gtf2h4 gtf2h4 ENSMAMP00000029947 ENSMAMP00000029947 cul4b cul4b RPA1 RPA1 ercc1 ercc1 tfpt tfpt ENSMAMP00000028361 ENSMAMP00000028361 COPS6 COPS6 LOC113138689 LOC113138689 nfrkb nfrkb gtf2h3 gtf2h3 rpa1 rpa1 ENSMAMP00000026684 ENSMAMP00000026684 pole3 pole3 LOC113132996 LOC113132996 actr5 actr5 RCBTB1 RCBTB1 actr8 actr8 ercc2 ercc2 LOC113128667 LOC113128667 ENSMAMP00000023641 ENSMAMP00000023641 rad23a rad23a ube2v2 ube2v2 ENSMAMP00000022904 ENSMAMP00000022904 LOC113144354 LOC113144354 pcna pcna pole pole ino80b ino80b ENSMAMP00000021732 ENSMAMP00000021732 ddb1 ddb1 RAD23B RAD23B ENSMAMP00000020458 ENSMAMP00000020458 cdk7 cdk7 chd1l chd1l RFC2 RFC2 ENSMAMP00000019064 ENSMAMP00000019064 ENSMAMP00000019030 ENSMAMP00000019030 ENSMAMP00000018993 ENSMAMP00000018993 YY1 YY1 polk polk ENSMAMP00000018194 ENSMAMP00000018194 rcbtb2 rcbtb2 cops2 cops2 ino80c ino80c ccnh ccnh ENSMAMP00000016318 ENSMAMP00000016318 pold3 pold3 ENSMAMP00000015134 ENSMAMP00000015134 LOC113139161 LOC113139161 LOC113142143 LOC113142143 ube2i ube2i cops8 cops8 parp2 parp2 LOC113137302-2 LOC113137302-2 LOC113137302 LOC113137302 GTF2H5 GTF2H5 kctd2 kctd2 LOC113127863 LOC113127863 ENSMAMP00000011048 ENSMAMP00000011048 pold2 pold2 kxd1 kxd1 rpa2 rpa2 rbx1 rbx1 rfc4 rfc4 cetn3 cetn3 ino80d ino80d
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
uba52Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
LOC113134865Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
pole2DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. (528 aa)
meiobMethionine sulfoxide reductase B1b. (469 aa)
actbUncharacterized protein. (377 aa)
ube2nUbiquitin conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family. (154 aa)
pias1Protein inhibitor of activated STAT, 1b. (655 aa)
LOC113140814UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
ddb2Damage-specific DNA binding protein 2. (527 aa)
cops4COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis). (406 aa)
ENSMAMP00000006861Microspherule protein 1. (450 aa)
rfc5Replication factor C (activator 1) 5. (335 aa)
ercc4Excision repair cross-complementation group 4. (900 aa)
ercc3Excision repair cross-complementation group 3. (783 aa)
gtf2h1General transcription factor IIH, polypeptide 1. (549 aa)
LOC113129987Ubiquitin-like domain-containing protein. (99 aa)
ENSMAMP00000006223Si:cabz01080528.1. (716 aa)
ino80eINO80 complex subunit E. (282 aa)
ENSMAMP00000005451Cullin 4A; Belongs to the cullin family. (684 aa)
pole4Polymerase (DNA-directed), epsilon 4, accessory subunit. (126 aa)
LOC113129257SCY domain-containing protein. (124 aa)
ENSMAMP00000005181COP9 constitutive photomorphogenic homolog subunit 7A. (336 aa)
ercc5Excision repair cross-complementation group 5. (1147 aa)
pold4Si:dkey-28b4.7. (108 aa)
gps1G protein pathway suppressor 1. (487 aa)
usp45Ubiquitin carboxyl-terminal hydrolase. (807 aa)
ENSMAMP00000003022Uncharacterized protein. (510 aa)
LOC113123972Small ubiquitin-related modifier. (95 aa)
mnat1CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (311 aa)
pold1DNA polymerase. (1119 aa)
rpap3RNA polymerase II associated protein 3. (668 aa)
LOC113128185Small ubiquitin-related modifier. (96 aa)
LOC113142672YY1 transcription factor. (350 aa)
ENSMAMP00000001719UBIQUITIN_CONJUGAT_2 domain-containing protein. (148 aa)
wdr76WD repeat-containing protein 76; Specifically binds 5-hydroxymethylcytosine (5hmC), suggesting that it acts as a specific reader of 5hmC. Belongs to the WD repeat DDB2/WDR76 family. (566 aa)
rpa3Replication protein A3. (122 aa)
cops3COP9 signalosome subunit 3. (445 aa)
ruvbl1RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (456 aa)
parp3Poly [ADP-ribose] polymerase. (531 aa)
ENSMAMP00000035212ATPase family AAA domain containing 5a. (1802 aa)
sumo2Small ubiquitin-related modifier. (95 aa)
cops5COP9 signalosome subunit 5. (334 aa)
sumo1Small ubiquitin-related modifier. (101 aa)
rps27aRibosomal protein S27a. (156 aa)
LOC113139794RAD23 homolog A, nucleotide excision repair protein b. (461 aa)
LOC113127185Regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1. (529 aa)
rnf111Ring finger protein 111. (1027 aa)
parp1Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair. (1010 aa)
gtf2h4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (461 aa)
ENSMAMP00000029947Replication factor C subunit 1. (1137 aa)
cul4bCullin 4B; Belongs to the cullin family. (870 aa)
RPA1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (672 aa)
ercc1Excision repair cross-complementation group 1. (352 aa)
tfptTCF3 (E2A) fusion partner. (199 aa)
ENSMAMP00000028361Si:dkey-117m1.4. (753 aa)
COPS6COP9 signalosome subunit 6. (316 aa)
LOC113138689Uncharacterized protein. (422 aa)
nfrkbNuclear factor related to kappaB binding protein. (1280 aa)
gtf2h3General transcription factor IIH, polypeptide 3. (334 aa)
rpa1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (600 aa)
ENSMAMP00000026684Rad60-SLD domain-containing protein. (158 aa)
pole3Polymerase (DNA directed), epsilon 3 (p17 subunit). (153 aa)
LOC113132996General transcription factor IIH subunit. (392 aa)
actr5Actin related protein 5; Belongs to the actin family. (623 aa)
RCBTB1RCC1 and BTB domain containing protein 1. (531 aa)
actr8Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily. (644 aa)
ercc2Excision repair cross-complementation group 2. (760 aa)
LOC113128667Uncharacterized protein. (506 aa)
ENSMAMP00000023641Xeroderma pigmentosum, complementation group C. (870 aa)
rad23aRAD23 homolog A, nucleotide excision repair protein a. (375 aa)
ube2v2Ubiquitin-conjugating enzyme E2 variant 2. (145 aa)
ENSMAMP00000022904Xeroderma pigmentosum, complementation group A. (277 aa)
LOC113144354Centrin 4. (171 aa)
pcnaProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (260 aa)
poleDNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2295 aa)
ino80bINO80 complex subunit B. (339 aa)
ENSMAMP00000021732Replication factor C (activator 1) 3. (423 aa)
ddb1Damage-specific DNA binding protein 1. (1140 aa)
RAD23BRAD23 homolog B, nucleotide excision repair protein. (386 aa)
ENSMAMP00000020458Uncharacterized protein. (189 aa)
cdk7Cyclin-dependent kinase 7; Belongs to the protein kinase superfamily. (343 aa)
chd1lChromodomain helicase DNA binding protein 1-like. (1015 aa)
RFC2Replication factor C (activator 1) 2. (359 aa)
ENSMAMP00000019064ATPase_AAA_core domain-containing protein. (146 aa)
ENSMAMP00000019030ATPase_AAA_core domain-containing protein. (97 aa)
ENSMAMP00000018993ATPase_AAA_core domain-containing protein. (157 aa)
YY1YY1 transcription factor b. (364 aa)
polkPolymerase (DNA directed) kappa. (885 aa)
ENSMAMP00000018194Protein inhibitor of activated STAT, 1a. (699 aa)
rcbtb2Regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2. (527 aa)
cops2COP9 signalosome subunit 2. (443 aa)
ino80cINO80 complex subunit C. (211 aa)
ccnhCyclin H; Belongs to the cyclin family. (326 aa)
ENSMAMP00000016318Von Willebrand factor A domain containing 5B2. (1046 aa)
pold3Polymerase (DNA-directed), delta 3, accessory subunit. (441 aa)
ENSMAMP00000015134Basic, immunoglobulin-like variable motif containing. (481 aa)
LOC113139161Si:ch73-290k24.6. (843 aa)
LOC113142143UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (153 aa)
ube2iUbiquitin-conjugating enzyme E2Ib; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
cops8COP9 signalosome subunit 8. (191 aa)
parp2Poly [ADP-ribose] polymerase. (649 aa)
LOC113137302-2General transcription factor IIH subunit 5. (71 aa)
LOC113137302General transcription factor IIH subunit 5. (71 aa)
GTF2H5General transcription factor IIH, polypeptide 5. (71 aa)
kctd2Potassium channel tetramerization domain containing 2. (271 aa)
LOC113127863Uncharacterized protein. (376 aa)
ENSMAMP00000011048Uncharacterized protein. (139 aa)
pold2Polymerase (DNA directed), delta 2, regulatory subunit. (470 aa)
kxd1KxDL motif containing 1. (184 aa)
rpa2Replication protein A2. (272 aa)
rbx1Ring-box 1, E3 ubiquitin protein ligase. (108 aa)
rfc4Replication factor C (activator 1) 4. (376 aa)
cetn3Centrin 3. (167 aa)
ino80dINO80 complex subunit Da. (994 aa)
Your Current Organism:
Mastacembelus armatus
NCBI taxonomy Id: 205130
Other names: M. armatus, Macrognathus armatus, zig-zag eel
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