STRINGSTRING
meiob meiob pola2 pola2 rpa3 rpa3 pold1 pold1 ENSMAMP00000003022 ENSMAMP00000003022 pold4 pold4 ENSMAMP00000006136 ENSMAMP00000006136 rfc5 rfc5 prim1 prim1 ENSMAMP00000035212 ENSMAMP00000035212 pola1 pola1 fen1 fen1 LOC113127185 LOC113127185 DNA2 DNA2 ENSMAMP00000029947 ENSMAMP00000029947 RPA1 RPA1 rpa1 rpa1 RCBTB1 RCBTB1 prim2 prim2 pcna pcna ENSMAMP00000021732 ENSMAMP00000021732 RFC2 RFC2 ENSMAMP00000019064 ENSMAMP00000019064 ENSMAMP00000019030 ENSMAMP00000019030 ENSMAMP00000018993 ENSMAMP00000018993 rcbtb2 rcbtb2 pold3 pold3 ENSMAMP00000013291 ENSMAMP00000013291 pold2 pold2 rpa2 rpa2 rfc4 rfc4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
meiobMethionine sulfoxide reductase B1b. (469 aa)
pola2DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis. (602 aa)
rpa3Replication protein A3. (122 aa)
pold1DNA polymerase. (1119 aa)
ENSMAMP00000003022Uncharacterized protein. (510 aa)
pold4Si:dkey-28b4.7. (108 aa)
ENSMAMP00000006136Zgc:110269. (348 aa)
rfc5Replication factor C (activator 1) 5. (335 aa)
prim1DNA primase; Belongs to the eukaryotic-type primase small subunit family. (419 aa)
ENSMAMP00000035212ATPase family AAA domain containing 5a. (1802 aa)
pola1DNA polymerase. (1480 aa)
fen1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (411 aa)
LOC113127185Regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1. (529 aa)
DNA2DNA replication helicase/nuclease 2. (1400 aa)
ENSMAMP00000029947Replication factor C subunit 1. (1137 aa)
RPA1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (672 aa)
rpa1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (600 aa)
RCBTB1RCC1 and BTB domain containing protein 1. (531 aa)
prim2DNA primase large subunit; Regulatory subunit of the DNA primase complex and component of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which play an essential role in the initiation of DNA synthesis. The primase subunit of the polymerase alpha complex initiates DNA synthesis by oligomerising short RNA primers on both leading and lagging strands. (540 aa)
pcnaProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (260 aa)
ENSMAMP00000021732Replication factor C (activator 1) 3. (423 aa)
RFC2Replication factor C (activator 1) 2. (359 aa)
ENSMAMP00000019064ATPase_AAA_core domain-containing protein. (146 aa)
ENSMAMP00000019030ATPase_AAA_core domain-containing protein. (97 aa)
ENSMAMP00000018993ATPase_AAA_core domain-containing protein. (157 aa)
rcbtb2Regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2. (527 aa)
pold3Polymerase (DNA-directed), delta 3, accessory subunit. (441 aa)
ENSMAMP00000013291DNA ligase. (987 aa)
pold2Polymerase (DNA directed), delta 2, regulatory subunit. (470 aa)
rpa2Replication protein A2. (272 aa)
rfc4Replication factor C (activator 1) 4. (376 aa)
Your Current Organism:
Mastacembelus armatus
NCBI taxonomy Id: 205130
Other names: M. armatus, Macrognathus armatus, zig-zag eel
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