67 items (Mastacembelus armatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	mgmt	O-6-methylguanine-DNA methyltransferase. (188 aa)
	ENSMAMP00000028361	Si:dkey-117m1.4. (753 aa)
	LOC113129486	Methyl-CpG binding domain protein 3a. (274 aa)
	ENSMAMP00000029187	Adenosine deaminase tRNA specific 2. (206 aa)
	nolc1	Nucleolar and coiled-body phosphoprotein 1. (1089 aa)
	parp1	Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair. (1010 aa)
	ENSMAMP00000030971	Uncharacterized protein. (538 aa)
	ENSMAMP00000031000	Poly [ADP-ribose] polymerase. (1168 aa)
	crispld2	Cysteine-rich secretory protein LCCL domain containing 2. (517 aa)
	fen1	Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (411 aa)
	crispld1	Cysteine-rich secretory protein LCCL domain containing 1a. (518 aa)
	LOC113133528	Thymine DNA glycosylase, tandem duplicate 1. (453 aa)
	LOC113132997	Thymine DNA glycosylase, tandem duplicate 2. (398 aa)
	ENSMAMP00000034629	Uncharacterized protein. (139 aa)
	apex1	DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. (343 aa)
	parp3	Poly [ADP-ribose] polymerase. (531 aa)
	MUTYH	Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs. (527 aa)
	mpg	N-methylpurine DNA glycosylase. (314 aa)
	pold4	Si:dkey-28b4.7. (108 aa)
	pold1	DNA polymerase. (1119 aa)
	ENSMAMP00000001523	Uncharacterized protein. (166 aa)
	lig3	DNA ligase. (1011 aa)
	pole4	Polymerase (DNA-directed), epsilon 4, accessory subunit. (126 aa)
	hmgb2	High mobility group box 2a. (242 aa)
	smug1	Single-strand-selective monofunctional uracil-DNA glycosylase 1. (282 aa)
	LOC113135213	Si:ch211-141o9.10. (309 aa)
	ENSMAMP00000006136	Zgc:110269. (348 aa)
	ENSMAMP00000006223	Si:cabz01080528.1. (716 aa)
	ENSMAMP00000007615	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (173 aa)
	ENSMAMP00000007807	Methyltransferase like 4; Belongs to the MT-A70-like family. (334 aa)
	ENSMAMP00000008560	R3H domain containing-like. (238 aa)
	pole2	DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. (528 aa)
	GTF3C1	General transcription factor IIIC subunit 1. (1799 aa)
	ENSMAMP00000010610	Nei-like DNA glycosylase 1. (455 aa)
	pold2	Polymerase (DNA directed), delta 2, regulatory subunit. (470 aa)
	gen1	Uncharacterized protein. (908 aa)
	ENSMAMP00000011577	PRKR interacting protein 1. (181 aa)
	parp2	Poly [ADP-ribose] polymerase. (649 aa)
	ENSMAMP00000013291	DNA ligase. (987 aa)
	xrcc1	X-ray repair complementing defective repair in Chinese hamster cells 1. (630 aa)
	ENSMAMP00000013450	Cache domain containing 1. (977 aa)
	LOC113134983	Uncharacterized protein. (262 aa)
	ENSMAMP00000014326	Uncharacterized protein. (139 aa)
	poll	Polymerase (DNA directed), lambda; Belongs to the DNA polymerase type-X family. (568 aa)
	LOC113125609	High mobility group box 1b. (200 aa)
	pold3	Polymerase (DNA-directed), delta 3, accessory subunit. (441 aa)
	ENSMAMP00000016318	Von Willebrand factor A domain containing 5B2. (1046 aa)
	ENSMAMP00000016826	HMG box domain-containing protein. (59 aa)
	LOC113145927	Uncharacterized protein. (200 aa)
	LOC113145341	Methyl CpG binding protein 2. (1030 aa)
	NTHL1	Endonuclease III-like protein 1; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines; Belongs to the Nth/MutY family. (276 aa)
	ENSMAMP00000018805	Calcium binding protein 5a. (184 aa)
	ENSMAMP00000019120	8-oxoguanine DNA glycosylase. (385 aa)
	ENSMAMP00000019621	Uncharacterized protein. (151 aa)
	ENSMAMP00000019950	Chromatin accessibility complex subunit 1. (119 aa)
	polb	DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity. (336 aa)
	pole	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2295 aa)
	pcna	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (260 aa)
	LOC113143114	High mobility group box 1a. (207 aa)
	ENSMAMP00000023508	Cysteine-rich secretory protein LCCL domain containing 1b. (498 aa)
	ung	Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. (300 aa)
	neil3	Nei-like DNA glycosylase 3. (582 aa)
	pole3	Polymerase (DNA directed), epsilon 3 (p17 subunit). (153 aa)
	LOC113124465	Methyl-CpG binding domain protein 2. (265 aa)
	apex2	DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. (581 aa)
	ENSMAMP00000035870	Methyl-CpG binding domain protein 4. (175 aa)
	ENSMAMP00000035869	MBD domain-containing protein. (344 aa)

Your Current Organism:

Mastacembelus armatus

NCBI taxonomy Id: 205130
Other names: M. armatus, Macrognathus armatus, zig-zag eel

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSMAMP00000006136	ENSMAMP00000006223	ENSMAMP00000006136	ENSMAMP00000006223	Zgc:110269.	Si:cabz01080528.1.	0.656
ENSMAMP00000006136	ENSMAMP00000010610	ENSMAMP00000006136	ENSMAMP00000010610	Zgc:110269.	Nei-like DNA glycosylase 1.	0.451
ENSMAMP00000006136	ENSMAMP00000013291	ENSMAMP00000006136	ENSMAMP00000013291	Zgc:110269.	DNA ligase.	0.989
ENSMAMP00000006136	ENSMAMP00000014326	ENSMAMP00000006136	ENSMAMP00000014326	Zgc:110269.	Uncharacterized protein.	0.786
ENSMAMP00000006136	ENSMAMP00000016318	ENSMAMP00000006136	ENSMAMP00000016318	Zgc:110269.	Von Willebrand factor A domain containing 5B2.	0.656
ENSMAMP00000006136	ENSMAMP00000016826	ENSMAMP00000006136	ENSMAMP00000016826	Zgc:110269.	HMG box domain-containing protein.	0.428
ENSMAMP00000006136	ENSMAMP00000019120	ENSMAMP00000006136	ENSMAMP00000019120	Zgc:110269.	8-oxoguanine DNA glycosylase.	0.656
ENSMAMP00000006136	ENSMAMP00000019621	ENSMAMP00000006136	ENSMAMP00000019621	Zgc:110269.	Uncharacterized protein.	0.786
ENSMAMP00000006136	ENSMAMP00000028361	ENSMAMP00000006136	ENSMAMP00000028361	Zgc:110269.	Si:dkey-117m1.4.	0.656
ENSMAMP00000006136	ENSMAMP00000030971	ENSMAMP00000006136	ENSMAMP00000030971	Zgc:110269.	Uncharacterized protein.	0.656
ENSMAMP00000006136	ENSMAMP00000031000	ENSMAMP00000006136	ENSMAMP00000031000	Zgc:110269.	Poly [ADP-ribose] polymerase.	0.656
ENSMAMP00000006136	ENSMAMP00000034629	ENSMAMP00000006136	ENSMAMP00000034629	Zgc:110269.	Uncharacterized protein.	0.786
ENSMAMP00000006136	LOC113125609	ENSMAMP00000006136	ENSMAMP00000015447	Zgc:110269.	High mobility group box 1b.	0.431
ENSMAMP00000006136	LOC113135213	ENSMAMP00000006136	ENSMAMP00000006078	Zgc:110269.	Si:ch211-141o9.10.	0.601
ENSMAMP00000006136	LOC113143114	ENSMAMP00000006136	ENSMAMP00000022491	Zgc:110269.	High mobility group box 1a.	0.431
ENSMAMP00000006136	LOC113145927	ENSMAMP00000006136	ENSMAMP00000016926	Zgc:110269.	Uncharacterized protein.	0.428
ENSMAMP00000006136	MUTYH	ENSMAMP00000006136	ENSMAMP00000001218	Zgc:110269.	Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs.	0.454
ENSMAMP00000006136	NTHL1	ENSMAMP00000006136	ENSMAMP00000017670	Zgc:110269.	Endonuclease III-like protein 1; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines; Belongs to the Nth/MutY family.	0.697
ENSMAMP00000006136	apex1	ENSMAMP00000006136	ENSMAMP00000035043	Zgc:110269.	DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends.	0.914
ENSMAMP00000006136	apex2	ENSMAMP00000006136	ENSMAMP00000036109	Zgc:110269.	DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends.	0.874