46 items (Mastacembelus armatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	fbh1	F-box DNA helicase 1. (1089 aa)
	rpa3	Replication protein A3. (122 aa)
	ENSMAMP00000001523	Uncharacterized protein. (166 aa)
	msh2	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (935 aa)
	pold1	DNA polymerase. (1119 aa)
	ENSMAMP00000003022	Uncharacterized protein. (510 aa)
	yju2	YJU2 splicing factor homolog. (341 aa)
	LOC113137102	Src homology 2 domain containing transforming protein D, a. (418 aa)
	pold4	Si:dkey-28b4.7. (108 aa)
	ENSMAMP00000005576	MutS homolog 4. (781 aa)
	ENSMAMP00000006478	STN1 subunit of CST complex. (338 aa)
	rfc5	Replication factor C (activator 1) 5. (335 aa)
	ENSMAMP00000007615	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (173 aa)
	mlh3	MutL homolog 3 (E. coli). (1173 aa)
	meiob	Methionine sulfoxide reductase B1b. (469 aa)
	rfc4	Replication factor C (activator 1) 4. (376 aa)
	pms2	PMS1 homolog 2, mismatch repair system component. (879 aa)
	rpa2	Replication protein A2. (272 aa)
	pold2	Polymerase (DNA directed), delta 2, regulatory subunit. (470 aa)
	ENSMAMP00000011414	Exonuclease 1. (740 aa)
	ENSMAMP00000011577	PRKR interacting protein 1. (181 aa)
	ENSMAMP00000013291	DNA ligase. (987 aa)
	pms1	PMS1 homolog 1, mismatch repair system component. (911 aa)
	pold3	Polymerase (DNA-directed), delta 3, accessory subunit. (441 aa)
	rexo4	REX4 homolog, 3'-5' exonuclease. (421 aa)
	ENSMAMP00000018805	Calcium binding protein 5a. (184 aa)
	ENSMAMP00000018806	DNA_MISMATCH_REPAIR_2 domain-containing protein. (170 aa)
	ENSMAMP00000018813	Uncharacterized protein. (113 aa)
	ENSMAMP00000018993	ATPase_AAA_core domain-containing protein. (157 aa)
	ENSMAMP00000019030	ATPase_AAA_core domain-containing protein. (97 aa)
	ENSMAMP00000019064	ATPase_AAA_core domain-containing protein. (146 aa)
	RFC2	Replication factor C (activator 1) 2. (359 aa)
	ENSMAMP00000021732	Replication factor C (activator 1) 3. (423 aa)
	pcna	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (260 aa)
	msh3	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1123 aa)
	mlh1	MutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli). (704 aa)
	ssbp1	Single-stranded DNA binding protein 1. (147 aa)
	rad17	RAD17 checkpoint clamp loader component. (636 aa)
	rpa1	Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (600 aa)
	ISG20L2	Interferon stimulated exonuclease gene 20 like 2. (380 aa)
	RPA1	Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (672 aa)
	ENSMAMP00000029947	Replication factor C subunit 1. (1137 aa)
	msh6	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1381 aa)
	sass6	SAS-6 centriolar assembly protein. (589 aa)
	LOC113132401	Interferon stimulated exonuclease gene. (351 aa)
	ENSMAMP00000035212	ATPase family AAA domain containing 5a. (1802 aa)

Your Current Organism:

Mastacembelus armatus

NCBI taxonomy Id: 205130
Other names: M. armatus, Macrognathus armatus, zig-zag eel

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSMAMP00000003022	ENSMAMP00000006478	ENSMAMP00000003022	ENSMAMP00000006478	Uncharacterized protein.	STN1 subunit of CST complex.	0.642
ENSMAMP00000003022	ENSMAMP00000011414	ENSMAMP00000003022	ENSMAMP00000011414	Uncharacterized protein.	Exonuclease 1.	0.949
ENSMAMP00000003022	ENSMAMP00000013291	ENSMAMP00000003022	ENSMAMP00000013291	Uncharacterized protein.	DNA ligase.	0.874
ENSMAMP00000003022	ENSMAMP00000018993	ENSMAMP00000003022	ENSMAMP00000018993	Uncharacterized protein.	ATPase_AAA_core domain-containing protein.	0.927
ENSMAMP00000003022	ENSMAMP00000019030	ENSMAMP00000003022	ENSMAMP00000019030	Uncharacterized protein.	ATPase_AAA_core domain-containing protein.	0.927
ENSMAMP00000003022	ENSMAMP00000019064	ENSMAMP00000003022	ENSMAMP00000019064	Uncharacterized protein.	ATPase_AAA_core domain-containing protein.	0.927
ENSMAMP00000003022	ENSMAMP00000021732	ENSMAMP00000003022	ENSMAMP00000021732	Uncharacterized protein.	Replication factor C (activator 1) 3.	0.993
ENSMAMP00000003022	ENSMAMP00000029947	ENSMAMP00000003022	ENSMAMP00000029947	Uncharacterized protein.	Replication factor C subunit 1.	0.537
ENSMAMP00000003022	RFC2	ENSMAMP00000003022	ENSMAMP00000019104	Uncharacterized protein.	Replication factor C (activator 1) 2.	0.927
ENSMAMP00000003022	RPA1	ENSMAMP00000003022	ENSMAMP00000029820	Uncharacterized protein.	Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage.	0.798
ENSMAMP00000003022	fbh1	ENSMAMP00000003022	ENSMAMP00000000719	Uncharacterized protein.	F-box DNA helicase 1.	0.791
ENSMAMP00000003022	meiob	ENSMAMP00000003022	ENSMAMP00000009063	Uncharacterized protein.	Methionine sulfoxide reductase B1b.	0.798
ENSMAMP00000003022	mlh1	ENSMAMP00000003022	ENSMAMP00000023011	Uncharacterized protein.	MutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli).	0.453
ENSMAMP00000003022	msh2	ENSMAMP00000003022	ENSMAMP00000001645	Uncharacterized protein.	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.497
ENSMAMP00000003022	msh3	ENSMAMP00000003022	ENSMAMP00000022627	Uncharacterized protein.	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.416
ENSMAMP00000003022	msh6	ENSMAMP00000003022	ENSMAMP00000032060	Uncharacterized protein.	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.544
ENSMAMP00000003022	pcna	ENSMAMP00000003022	ENSMAMP00000022273	Uncharacterized protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.979
ENSMAMP00000003022	pold1	ENSMAMP00000003022	ENSMAMP00000002482	Uncharacterized protein.	DNA polymerase.	0.853
ENSMAMP00000003022	pold2	ENSMAMP00000003022	ENSMAMP00000010843	Uncharacterized protein.	Polymerase (DNA directed), delta 2, regulatory subunit.	0.743
ENSMAMP00000003022	pold3	ENSMAMP00000003022	ENSMAMP00000015949	Uncharacterized protein.	Polymerase (DNA-directed), delta 3, accessory subunit.	0.794