STRINGSTRING
Psyr_0047 Psyr_0047 Psyr_0048 Psyr_0048 Psyr_0050 Psyr_0050 Psyr_0051 Psyr_0051 Psyr_0052 Psyr_0052 Psyr_0053 Psyr_0053
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Psyr_0047Hypothetical protein. (100 aa)
Psyr_0048Conserved hypothetical protein. (76 aa)
Psyr_0050Lysine exporter protein (LYSE/YGGA). (210 aa)
Psyr_0051Conserved hypothetical protein. (197 aa)
Psyr_0052ABC transporter. (636 aa)
Psyr_0053Conserved hypothetical protein. (158 aa)
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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