STRINGSTRING
Psyr_3874 Psyr_3874 Psyr_1968 Psyr_1968 Psyr_0138 Psyr_0138 Psyr_1997 Psyr_1997 Psyr_2037 Psyr_2037 Psyr_2038 Psyr_2038 Psyr_3082 Psyr_3082 Psyr_3046 Psyr_3046 Psyr_2969 Psyr_2969 Psyr_2962 Psyr_2962 Psyr_2958 Psyr_2958 Psyr_2941 Psyr_2941 Psyr_2902 Psyr_2902 Psyr_2892 Psyr_2892 Psyr_2884 Psyr_2884 Psyr_2877 Psyr_2877 Psyr_2864 Psyr_2864 Psyr_2863 Psyr_2863 Psyr_2756 Psyr_2756 Psyr_2678 Psyr_2678 Psyr_2620 Psyr_2620 Psyr_2606 Psyr_2606 Psyr_2582 Psyr_2582 Psyr_2569 Psyr_2569 Psyr_1962 Psyr_1962 Psyr_1961 Psyr_1961 Psyr_1804 Psyr_1804 Psyr_1784 Psyr_1784 Psyr_1759 Psyr_1759 Psyr_1758 Psyr_1758 Psyr_1697 Psyr_1697 Psyr_1599 Psyr_1599 Psyr_1570 Psyr_1570 Psyr_1549 Psyr_1549 Psyr_1517 Psyr_1517 Psyr_1494 Psyr_1494 cpoB cpoB pal pal Psyr_1414 Psyr_1414 Psyr_1373 Psyr_1373 Psyr_1352 Psyr_1352 bamA bamA Psyr_1317 Psyr_1317 mltF mltF bamB bamB Psyr_1246 Psyr_1246 HrcC HrcC HrcJ HrcJ Psyr_1134 Psyr_1134 Psyr_1133 Psyr_1133 Psyr_1132 Psyr_1132 Psyr_1117 Psyr_1117 Psyr_1105 Psyr_1105 Psyr_1072 Psyr_1072 Psyr_1060 Psyr_1060 Psyr_1059 Psyr_1059 Psyr_1045 Psyr_1045 Psyr_1038 Psyr_1038 Psyr_1029 Psyr_1029 Psyr_2542 Psyr_2542 Psyr_2061 Psyr_2061 Psyr_2071 Psyr_2071 Psyr_2151 Psyr_2151 Psyr_2170 Psyr_2170 Psyr_2191 Psyr_2191 Psyr_2229 Psyr_2229 Psyr_2238 Psyr_2238 Psyr_2267 Psyr_2267 Psyr_2287 Psyr_2287 Psyr_3908 Psyr_3908 Psyr_3956 Psyr_3956 Psyr_4009 Psyr_4009 Psyr_4113 Psyr_4113 Psyr_2503 Psyr_2503 Psyr_2485 Psyr_2485 Psyr_2478 Psyr_2478 Psyr_2463 Psyr_2463 Psyr_2376 Psyr_2376 Psyr_2293 Psyr_2293 Psyr_2290 Psyr_2290 Psyr_0135 Psyr_0135 Psyr_0974 Psyr_0974 Psyr_0953 Psyr_0953 lolB lolB Psyr_0900 Psyr_0900 Psyr_0876 Psyr_0876 Psyr_0875 Psyr_0875 Psyr_0817 Psyr_0817 Psyr_0776 Psyr_0776 Psyr_0763 Psyr_0763 Psyr_0753 Psyr_0753 bamD bamD FecB FecB Psyr_0569 Psyr_0569 Psyr_0555 Psyr_0555 Psyr_3124 Psyr_3124 Psyr_3141 Psyr_3141 Psyr_3166 Psyr_3166 Psyr_0513 Psyr_0513 Psyr_0407 Psyr_0407 Psyr_0368 Psyr_0368 Psyr_0265 Psyr_0265 Psyr_0223 Psyr_0223 Psyr_0203 Psyr_0203 Psyr_0181 Psyr_0181 Psyr_0157 Psyr_0157 Psyr_0139 Psyr_0139 Psyr_3669 Psyr_3669 Psyr_3769 Psyr_3769 bamA-2 bamA-2 Psyr_3858 Psyr_3858 Psyr_3864 Psyr_3864 Psyr_1965 Psyr_1965 Psyr_5077 Psyr_5077 Psyr_4078 Psyr_4078 Psyr_4891 Psyr_4891 Psyr_4887 Psyr_4887 Psyr_4826 Psyr_4826 Psyr_4802 Psyr_4802 Psyr_4801 Psyr_4801 surA surA lptD lptD Psyr_4606 Psyr_4606 Psyr_4499 Psyr_4499 Psyr_4496 Psyr_4496 Psyr_4483 Psyr_4483 Psyr_4480 Psyr_4480 Psyr_4473 Psyr_4473 Psyr_4363 Psyr_4363 Psyr_4357 Psyr_4357 lptE lptE Psyr_4238 Psyr_4238 Psyr_4236 Psyr_4236 Psyr_4235 Psyr_4235 Psyr_4234 Psyr_4234 Psyr_4211 Psyr_4211 bamE bamE Psyr_4175 Psyr_4175 rlpA rlpA lptA lptA lptC lptC Psyr_4116 Psyr_4116 Psyr_3195 Psyr_3195 Psyr_3232 Psyr_3232 Psyr_3243 Psyr_3243 Psyr_3265 Psyr_3265 Psyr_3345 Psyr_3345 AmpC AmpC Psyr_3381 Psyr_3381 flgI flgI flgH flgH Psyr_3571 Psyr_3571 Psyr_3590 Psyr_3590
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Psyr_3874Amino acid ABC transporter substrate-binding protein, PAAT family; TC 3.A.1.3.-; Belongs to the bacterial solute-binding protein 3 family. (260 aa)
Psyr_1968RND efflux system, outer membrane lipoprotein, NodT. (462 aa)
Psyr_0138TonB-dependent receptor:TonB-dependent receptor. (904 aa)
Psyr_1997Amino acid ABC transporter substrate-binding protein, PAAT family; TC 3.A.1.3.-. (275 aa)
Psyr_2037Fimbrial biogenesis outer membrane usher protein. (837 aa)
Psyr_2038Pili assembly chaperone:Bacterial pili assembly chaperone. (248 aa)
Psyr_3082MltA-interacting MipA. (282 aa)
Psyr_3046Protein of unknown function DUF330. (207 aa)
Psyr_2969RND efflux system, outer membrane lipoprotein, NodT. (465 aa)
Psyr_2962Amino acid ABC transporter substrate-binding protein, PAAT family; TC 3.A.1.3.-. (290 aa)
Psyr_2958Extracellular solute-binding protein, family 5. (543 aa)
Psyr_2941Amino acid ABC transporter substrate-binding protein, PAAT family; TC 3.A.1.3.-. (290 aa)
Psyr_2902Extracellular solute-binding protein, family 5. (622 aa)
Psyr_2892TonB-dependent receptor:TonB-dependent receptor. (815 aa)
Psyr_2884Xylose-binding protein. (333 aa)
Psyr_2877Monosaccharide ABC transporter substrate-binding protein, CUT2 family; TC 3.A.1.2.-. (334 aa)
Psyr_2864RND efflux system, outer membrane lipoprotein, NodT. (468 aa)
Psyr_2863Feruloyl esterase. (579 aa)
Psyr_2756Molybdenum ABC transporter, periplasmic binding protein. (255 aa)
Psyr_2678Extracellular solute-binding protein, family 5. (500 aa)
Psyr_2620RND efflux system, outer membrane lipoprotein, NodT. (476 aa)
Psyr_2606RND efflux system, outer membrane lipoprotein, NodT. (478 aa)
Psyr_2582TonB-dependent siderophore receptor. (802 aa)
Psyr_2569Monosaccharide ABC transporter substrate-binding protein, CUT2 family; TC 3.A.1.2.-. (336 aa)
Psyr_1962TonB-dependent siderophore receptor. (746 aa)
Psyr_1961TonB-dependent siderophore receptor. (803 aa)
Psyr_1804Conserved hypothetical protein. (261 aa)
Psyr_1784TonB-dependent siderophore receptor. (717 aa)
Psyr_1759Extracellular solute-binding protein, family 5. (609 aa)
Psyr_1758Extracellular solute-binding protein, family 5. (618 aa)
Psyr_1697Conserved hypothetical protein. (248 aa)
Psyr_1599C-terminal processing peptidase-1, Serine peptidase, MEROPS family S41A; Belongs to the peptidase S41A family. (704 aa)
Psyr_1570Copper resistance B precursor. (302 aa)
Psyr_1549Lipoprotein, putative. (372 aa)
Psyr_1517Type II and III secretion system protein. (578 aa)
Psyr_1494Copper resistance B precursor. (312 aa)
cpoBTPR repeat protein; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family. (248 aa)
palOmpA/MotB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. (167 aa)
Psyr_1414Cell division and transport-associated protein TolA; TC 2.C.1.2.1. (356 aa)
Psyr_1373Peptidoglycan-binding LysM:Peptidase M23B. (288 aa)
Psyr_1352Outer membrane protein (OmpH-like). (159 aa)
bamASurface antigen (D15):Surface antigen variable number; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (791 aa)
Psyr_1317Conserved hypothetical protein. (132 aa)
mltFExtracellular solute-binding protein, family 3:SLT; Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella. In the N-terminal section; belongs to the bacterial solute- binding protein 3 family. (498 aa)
bamBQuinoprotein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (381 aa)
Psyr_1246TPR repeat protein:TPR repeat protein. (252 aa)
HrcCOuter-membrane type III secretion protein HrcC. (700 aa)
HrcJType III secretion apparatus lipoprotein, YscJ/HrcJ family. (268 aa)
Psyr_1134Pili assembly chaperone. (261 aa)
Psyr_1133Fimbrial biogenesis outer membrane usher protein. (844 aa)
Psyr_1132Pili assembly chaperone:Bacterial pili assembly chaperone. (264 aa)
Psyr_1117Porin, OprB family; TC 1.B.19. (453 aa)
Psyr_1105TonB-dependent hemoglobin/transferrin/lactoferrin receptor:TonB-dependent heme/hemoglobin receptor. (859 aa)
Psyr_1072Amino acid ABC transporter substrate-binding protein, PAAT family; TC 3.A.1.3.-. (342 aa)
Psyr_1060Sel1-like repeat protein. (470 aa)
Psyr_1059Alginate export porin; TC 1.B.13. (494 aa)
Psyr_1045RND efflux system, outer membrane lipoprotein, NodT. (494 aa)
Psyr_1038TonB-dependent siderophore receptor. (782 aa)
Psyr_1029Peptidase aspartic, active site. (654 aa)
Psyr_2542Extracellular solute-binding protein, family 5. (521 aa)
Psyr_2061SLT; Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella. In the N-terminal section; belongs to the bacterial solute- binding protein 3 family. (473 aa)
Psyr_2071Outer membrane lipoprotein OprI. (83 aa)
Psyr_2151Monosaccharide ABC transporter substrate-binding protein, CUT2 family; TC 3.A.1.2.-. (319 aa)
Psyr_2170L-glutamate-binding protein / L-aspartate-binding protein. (304 aa)
Psyr_2191RND efflux system, outer membrane lipoprotein, NodT. (490 aa)
Psyr_2229TonB-dependent siderophore receptor. (703 aa)
Psyr_2238Monosaccharide ABC transporter substrate-binding protein, CUT2 family; TC 3.A.1.2.-. (306 aa)
Psyr_2267Extracellular solute-binding protein, family 5. (506 aa)
Psyr_2287Outer membrane transport energization protein TonB; TC 2.C.1.1.1. (277 aa)
Psyr_3908L-aspartate-binding protein / L-glutamate-binding protein. (333 aa)
Psyr_3956Sigma E regulatory protein, MucB/RseB. (319 aa)
Psyr_4009RND efflux system, outer membrane lipoprotein, NodT. (486 aa)
Psyr_4113LppC putative lipoprotein. (604 aa)
Psyr_2503Amino acid ABC transporter substrate-binding protein, PAAT family; TC 3.A.1.3.-. (283 aa)
Psyr_2485RND efflux system, outer membrane lipoprotein, NodT. (487 aa)
Psyr_2478Surface antigen (D15):Surface antigen variable number. (574 aa)
Psyr_2463Monosaccharide ABC transporter substrate-binding protein, CUT2 family; TC 3.A.1.2.-. (366 aa)
Psyr_2376MltA-interacting MipA. (259 aa)
Psyr_2293Conserved hypothetical protein. (356 aa)
Psyr_2290TonB-dependent receptor:TonB-dependent receptor. (800 aa)
Psyr_0135Outer membrane transport energization protein TonB; TC 2.C.1.1.1. (274 aa)
Psyr_0974Amino acid ABC transporter substrate-binding protein, PAAT family; TC 3.A.1.3.-; Belongs to the bacterial solute-binding protein 3 family. (273 aa)
Psyr_0953Conserved hypothetical protein; Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety; Belongs to the PagL family. (172 aa)
lolBOuter membrane lipoprotein LolB; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein. (205 aa)
Psyr_0900TRAP dicarboxylate transporter- DctP subunit. (341 aa)
Psyr_0876TonB-dependent receptor:TonB-dependent receptor, C-terminal. (760 aa)
Psyr_0875Outer membrane transport energization protein TonB; TC 2.C.1.1.1. (254 aa)
Psyr_0817N-acetylmuramoyl-L-alanine amidase, family 2. (182 aa)
Psyr_0776Monosaccharide ABC transporter substrate-binding protein, CUT2 family; TC 3.A.1.2.-. (314 aa)
Psyr_0763Porin, LamB type. (525 aa)
Psyr_0753Protein of unknown function DUF187. (393 aa)
bamDCompetence lipoprotein ComL, putative; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (340 aa)
FecBPeriplasmic binding protein. (306 aa)
Psyr_0569N-acetylmuramoyl-L-alanine amidase. (471 aa)
Psyr_0555Protein of unknown function DUF330. (232 aa)
Psyr_3124TonB-dependent siderophore receptor. (710 aa)
Psyr_3141Type II and III secretion system protein:NolW-like protein. (776 aa)
Psyr_3166ABC transporter, periplasmic substrate-binding protein, putative. (259 aa)
Psyr_0513Amino acid ABC transporter substrate-binding protein, PAAT family; TC 3.A.1.3.-. (251 aa)
Psyr_0407Type II and III secretion system protein:NolW-like protein:NolW-like protein. (718 aa)
Psyr_0368Lipoprotein Blc; Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids. (192 aa)
Psyr_0265N-acetylmuramoyl-L-alanine amidase, family 2. (283 aa)
Psyr_0223Extracellular solute-binding protein, family 5. (528 aa)
Psyr_0203Outer membrane transport energization protein TonB; TC 2.C.1.1.1. (248 aa)
Psyr_0181Lipoprotein LppL. (48 aa)
Psyr_0157Twin-arginine translocation pathway signal. (545 aa)
Psyr_0139Extracellular solute-binding protein, family 5. (627 aa)
Psyr_3669Membrane protein involved in aromatic hydrocarbon degradation. (427 aa)
Psyr_3769TonB-dependent siderophore receptor. (724 aa)
bamA-2Surface antigen (D15):Surface antigen variable number; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (790 aa)
Psyr_3858Nucleoside-specific channel-forming protein, Tsx. (319 aa)
Psyr_3864TonB-dependent siderophore receptor. (811 aa)
Psyr_1965Twin-arginine translocation pathway signal. (426 aa)
Psyr_5077N-acetylmuramoyl-L-alanine amidase. (408 aa)
Psyr_4078AmpG-related permease. (516 aa)
Psyr_4891Amino acid ABC transporter substrate-binding protein, PAAT family; TC 3.A.1.3.-. (251 aa)
Psyr_4887Peptidase S41A, C-terminal protease; Belongs to the peptidase S41A family. (445 aa)
Psyr_4826TonB-dependent receptor:TonB box, N-terminal. (755 aa)
Psyr_4802Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (424 aa)
Psyr_4801Outer membrane efflux protein. (408 aa)
surAPpiC-type peptidyl-prolyl cis-trans isomerase; Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation. (442 aa)
lptDOrganic solvent tolerance protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. (926 aa)
Psyr_4606Outer membrane autotransporter barrel. (640 aa)
Psyr_4499TonB-dependent siderophore receptor. (706 aa)
Psyr_4496Outer membrane transport energization protein TonB; TC 2.C.1.1.1. (237 aa)
Psyr_4483TonB-dependent receptor:TonB-dependent receptor. (768 aa)
Psyr_4480Outer membrane transport energization protein TonB; TC 2.C.1.1.1. (269 aa)
Psyr_4473OmpW. (228 aa)
Psyr_4363Membrane-bound lytic murein transglycosylase B. (335 aa)
Psyr_4357HopAJ2 protein; Not a type III effector. (445 aa)
lptERare lipoprotein B; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane. (201 aa)
Psyr_4238Extracellular solute-binding protein, family 5. (531 aa)
Psyr_4236Extracellular solute-binding protein, family 5. (530 aa)
Psyr_4235Extracellular solute-binding protein, family 5. (542 aa)
Psyr_4234Extracellular solute-binding protein, family 5. (535 aa)
Psyr_4211Extracellular solute-binding protein, family 5. (504 aa)
bamESmpA/OmlA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (173 aa)
Psyr_4175Transport-associated protein. (117 aa)
rlpARare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. (145 aa)
lptAOstA-like protein; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm. (182 aa)
lptCProtein of unknown function DUF1239; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. Facilitates the transfer of LPS from the inner membrane to the periplasmic protein LptA. Could be a docking site for LptA. (190 aa)
Psyr_4116Transport-associated protein. (192 aa)
Psyr_3195NolW-like protein. (247 aa)
Psyr_3232Polysaccharide export protein. (362 aa)
Psyr_3243TonB-dependent siderophore receptor. (728 aa)
Psyr_3265Monosaccharide ABC transporter substrate-binding protein, CUT2 family; TC 3.A.1.2.-. (311 aa)
Psyr_3345TonB-dependent siderophore receptor. (705 aa)
AmpCBeta-lactamase. (385 aa)
Psyr_3381RND efflux system, outer membrane lipoprotein, NodT. (477 aa)
flgIFlagellar P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (369 aa)
flgHFlagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (237 aa)
Psyr_3571L-arginine-binding protein / L-ornithine-binding protein. (258 aa)
Psyr_3590Conserved hypothetical protein. (161 aa)
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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