STRINGSTRING
APZ07168.1 APZ07168.1 APZ07170.1 APZ07170.1 APZ07171.1 APZ07171.1 APZ07172.1 APZ07172.1 APZ07173.1 APZ07173.1 APZ07174.1 APZ07174.1 APZ07175.1 APZ07175.1 rfbA rfbA APZ07710.1 APZ07710.1 rfbB rfbB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
APZ07168.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (349 aa)
APZ07170.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (475 aa)
APZ07171.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (423 aa)
APZ07172.1Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (368 aa)
APZ07173.1N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (152 aa)
APZ07174.1dTDP-6-deoxy-3,4-keto-hexulose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (139 aa)
APZ07175.1dTDP-4-dehydrorhamnose 3,5-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (184 aa)
rfbAGlucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. (292 aa)
APZ07710.1dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family. (299 aa)
rfbBdTDP-glucose 4,6-dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. (360 aa)
Your Current Organism:
Kosakonia cowanii
NCBI taxonomy Id: 208223
Other names: CCUG 45998 A, CCUG 45998 B, CIP 107300, DSM 18146, Enterobacter cowanii, Enterobacter cowanii Inoue et al. 2001, JCM 10956, K. cowanii, Kosakonia cowanii (Inoue et al. 2001) Brady et al. 2013, LMG 23569, LMG:23569, NIH group 42, strain 888-76, strain KSK 246, strain UM-79
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