(6 nodes) Cyanoamino acid metabolism network (Enterobacter kobei)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

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protein homology

Your Input:
	OLR17678.1	Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 3 family. (755 aa)
	glyA	Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. (417 aa)
	OLR17881.1	N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase; Derived by automated computational analysis using gene prediction method: Protein Homology. (318 aa)
	OLR21716.1	L-asparaginase 1; Derived by automated computational analysis using gene prediction method: Protein Homology. (338 aa)
	OLR18912.1	Gamma-glutamyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (582 aa)
	asnA	Aspartate--ammonia ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (330 aa)

Your Current Organism:

Enterobacter kobei

NCBI taxonomy Id: 208224
Other names: ATCC BAA-260, CCUG 49023, CIP 105566, DSM 13645, E. kobei, Enterobacter sp. 35730, Enterobacter sp. 42202, Enterobacter sp. 44593, Enterobacter sp. GN02186, Enterobacter sp. GN02204, Enterobacter sp. GN02225, Enterobacter sp. GN02266, Enterobacter sp. GN02275, Enterobacter sp. GN02366, Enterobacter sp. GN02454, Enterobacter sp. GN02825, Enterobacter sp. GN03191, JCM 8580, NIH group 21

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OLR17881.1	OLR21716.1	BH713_15275	BH713_08985	N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase; Derived by automated computational analysis using gene prediction method: Protein Homology.	L-asparaginase 1; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.742
OLR18912.1	OLR21716.1	BH713_20905	BH713_08985	Gamma-glutamyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	L-asparaginase 1; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.771
OLR21716.1	OLR17881.1	BH713_08985	BH713_15275	L-asparaginase 1; Derived by automated computational analysis using gene prediction method: Protein Homology.	N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.742
OLR21716.1	OLR18912.1	BH713_08985	BH713_20905	L-asparaginase 1; Derived by automated computational analysis using gene prediction method: Protein Homology.	Gamma-glutamyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.771
OLR21716.1	asnA	BH713_08985	BH713_19320	L-asparaginase 1; Derived by automated computational analysis using gene prediction method: Protein Homology.	Aspartate--ammonia ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.828
asnA	OLR21716.1	BH713_19320	BH713_08985	Aspartate--ammonia ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	L-asparaginase 1; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.828

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