STRINGSTRING
SAG0099 SAG0099 truA truA SAG0101 SAG0101 SAG0102 SAG0102 SAG0103 SAG0103 SAG0463 SAG0463 bioB bioB SAG0465 SAG0465 SAG0756 SAG0756 SAG0757 SAG0757 SAG0817 SAG0817 birA birA SAG0832 SAG0832 SAG0833 SAG0833 SAG0834 SAG0834 SAG0835 SAG0835 SAG0836 SAG0836 SAG0837 SAG0837 SAG0838 SAG0838 SAG0839 SAG0839 thiD thiD thiM thiM thiE thiE SAG0844 SAG0844 SAG0845 SAG0845 map map SAG0847 SAG0847 SAG1065 SAG1065 SAG1632 SAG1632 SAG1633 SAG1633 SAG1634 SAG1634 ecfT ecfT ecfA2 ecfA2 ecfA1 ecfA1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SAG0099Transcriptional regulator, GntR family; Identified by match to PFAM protein family HMM PF00392. (415 aa)
truAtRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. (258 aa)
SAG0101Phosphomethylpyrimidine kinase, putative; Identified by match to PFAM protein family HMM PF00294. (252 aa)
SAG0102Conserved hypothetical protein; Identified by Glimmer2; putative. (154 aa)
SAG0103Conserved hypothetical protein TIGR01440; Identified by Glimmer2; putative; Belongs to the UPF0340 family. (189 aa)
SAG0463BioY family protein; Identified by match to PFAM protein family HMM PF02632. (179 aa)
bioBBiotin synthetase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. (330 aa)
SAG0465Hypothetical protein; Identified by Glimmer2; putative. (164 aa)
SAG0756Conserved hypothetical protein; Identified by Glimmer2; putative. (174 aa)
SAG0757Protein of unknown function/lipoprotein, putative; Similar to GP:13621804; identified by sequence similarity; putative; The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. (129 aa)
SAG0817Membrane protein, putative; Similar to OMNI:NTL01SPL0446; identified by sequence similarity; putative. (187 aa)
birAbiotin--acetyl-CoA-carboxylase ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. (311 aa)
SAG0832Protein of unknown function; Identified by Glimmer2; putative; The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. (753 aa)
SAG0833Hypothetical protein; Identified by Glimmer2; putative. (181 aa)
SAG0834Hypothetical protein; Identified by Glimmer2; putative. (42 aa)
SAG0835Conserved hypothetical protein; Identified by Glimmer2; putative. (188 aa)
SAG0836Conserved hypothetical protein; Identified by Glimmer2; putative. (184 aa)
SAG0837ABC transporter, ATP-binding protein; Identified by match to PFAM protein family HMM PF00005. (428 aa)
SAG0838Hypothetical protein; Identified by Glimmer2; putative. (233 aa)
SAG0839Transcriptional regulator, TenA family; Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway; Belongs to the TenA family. (226 aa)
thiDPhosphomethylpyrimidine kinase; Identified by match to TIGR protein family HMM TIGR00097. (265 aa)
thiMHydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family. (256 aa)
thiEThiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. (223 aa)
SAG0844Acetyltransferase, GNAT family; Identified by match to PFAM protein family HMM PF00583. (184 aa)
SAG0845CBS domain protein; Identified by match to PFAM protein family HMM PF00571. (427 aa)
mapMethionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. (286 aa)
SAG0847Ribonuclease BN, putative; Identified by match to TIGR protein family HMM TIGR00765. (306 aa)
SAG1065Membrane protein, putative; Similar to OMNI:NTL01SPL0962; identified by sequence similarity; putative. (190 aa)
SAG1632Identified by match to PFAM protein family HMM PF02361. (276 aa)
SAG1633ABC transporter, ATP-binding protein; Probably part of an ABC transporter complex. Responsible for energy coupling to the transport system (By similarity). (558 aa)
SAG1634Conserved hypothetical protein; Identified by Glimmer2; putative. (212 aa)
ecfTCobalt transport family protein; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. (264 aa)
ecfA2ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. (280 aa)
ecfA1ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. (279 aa)
Your Current Organism:
Streptococcus agalactiae
NCBI taxonomy Id: 208435
Other names: S. agalactiae 2603V/R, Streptococcus agalactiae 2603V/R, Streptococcus agalactiae str. 2603V/R
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