STRINGSTRING
carA-2 carA-2 pyrB pyrB carA-1 carA-1 pyrDA pyrDA SAG1812 SAG1812 upp upp pyrF pyrF
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
carA-2Carbamoyl-phosphate synthase, small subunit; Identified by match to PFAM protein family HMM PF00117; Belongs to the CarA family. (356 aa)
pyrBAspartate carbamoyltransferase; Identified by match to PFAM protein family HMM PF00185; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. (307 aa)
carA-1Carbamoyl-phosphate synthase, small subunit; Identified by match to PFAM protein family HMM PF00117; Belongs to the CarA family. (358 aa)
pyrDADihydroorotate dehydrogenase A; Catalyzes the conversion of dihydroorotate to orotate with fumarate as the electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily. (310 aa)
SAG1812Hexulose-6-phosphate synthase, putative; Similar to SP:Q48907 PID:2104220; identified by sequence similarity; putative. (221 aa)
uppUracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. (209 aa)
pyrFOrotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. (233 aa)
Your Current Organism:
Streptococcus agalactiae
NCBI taxonomy Id: 208435
Other names: S. agalactiae 2603V/R, Streptococcus agalactiae 2603V/R, Streptococcus agalactiae str. 2603V/R
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