Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SAG0040 | SAG0042 | SAG0040 | SAG0042 | ROK family protein; Identified by match to PFAM protein family HMM PF00480; The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. | Phosphosugar-binding transcriptional regulator, RpiR family; Identified by match to PFAM protein family HMM PF01380. | 0.579 |
| SAG0040 | SAG0332 | SAG0040 | SAG0332 | ROK family protein; Identified by match to PFAM protein family HMM PF00480; The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. | Identified by match to PFAM protein family HMM PF00923. | 0.414 |
| SAG0040 | fba | SAG0040 | SAG0127 | ROK family protein; Identified by match to PFAM protein family HMM PF00480; The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. | Fructose-bisphosphate aldolase; Identified by match to PFAM protein family HMM PF01116. | 0.448 |
| SAG0040 | glk | SAG0040 | SAG0471 | ROK family protein; Identified by match to PFAM protein family HMM PF00480; The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. | Glucokinase; Identified by match to PFAM protein family HMM PF00480. | 0.531 |
| SAG0040 | pfk | SAG0040 | SAG0940 | ROK family protein; Identified by match to PFAM protein family HMM PF00480; The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. | 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. | 0.456 |
| SAG0040 | pgi | SAG0040 | SAG0402 | ROK family protein; Identified by match to PFAM protein family HMM PF00480; The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. | Glucose-6-phosphate isomerase; Identified by match to PFAM protein family HMM PF00342. | 0.665 |
| SAG0040 | rpe | SAG0040 | SAG1776 | ROK family protein; Identified by match to PFAM protein family HMM PF00480; The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. | Ribulose-phosphate 3-epimerase; Identified by match to PFAM protein family HMM PF00834; Belongs to the ribulose-phosphate 3-epimerase family. | 0.464 |
| SAG0040 | tal | SAG0040 | SAG1809 | ROK family protein; Identified by match to PFAM protein family HMM PF00480; The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. | Transaldolase family protein; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily. | 0.414 |
| SAG0040 | tkt | SAG0040 | SAG0278 | ROK family protein; Identified by match to PFAM protein family HMM PF00480; The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | 0.441 |
| SAG0042 | SAG0040 | SAG0042 | SAG0040 | Phosphosugar-binding transcriptional regulator, RpiR family; Identified by match to PFAM protein family HMM PF01380. | ROK family protein; Identified by match to PFAM protein family HMM PF00480; The product of this gene was detected by Western blot analysis. For details on the method see Tettelin et al. 2002. | 0.579 |
| SAG0042 | SAG0332 | SAG0042 | SAG0332 | Phosphosugar-binding transcriptional regulator, RpiR family; Identified by match to PFAM protein family HMM PF01380. | Identified by match to PFAM protein family HMM PF00923. | 0.458 |
| SAG0042 | SAG0697 | SAG0042 | SAG0697 | Phosphosugar-binding transcriptional regulator, RpiR family; Identified by match to PFAM protein family HMM PF01380. | 2-keto-3-deoxygluconate kinase; Identified by match to PFAM protein family HMM PF00294. | 0.424 |
| SAG0042 | SAG1906 | SAG0042 | SAG1906 | Phosphosugar-binding transcriptional regulator, RpiR family; Identified by match to PFAM protein family HMM PF01380. | Carbohydrate kinase, PfkB family; Identified by match to PFAM protein family HMM PF00294. | 0.580 |
| SAG0042 | eda-1 | SAG0042 | SAG0700 | Phosphosugar-binding transcriptional regulator, RpiR family; Identified by match to PFAM protein family HMM PF01380. | 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; Identified by match to PFAM protein family HMM PF01081. | 0.565 |
| SAG0042 | eda-2 | SAG0042 | SAG1907 | Phosphosugar-binding transcriptional regulator, RpiR family; Identified by match to PFAM protein family HMM PF01380. | 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; Identified by match to PFAM protein family HMM PF01081. | 0.644 |
| SAG0042 | eno | SAG0042 | SAG0628 | Phosphosugar-binding transcriptional regulator, RpiR family; Identified by match to PFAM protein family HMM PF01380. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.625 |
| SAG0042 | fba | SAG0042 | SAG0127 | Phosphosugar-binding transcriptional regulator, RpiR family; Identified by match to PFAM protein family HMM PF01380. | Fructose-bisphosphate aldolase; Identified by match to PFAM protein family HMM PF01116. | 0.663 |
| SAG0042 | gap | SAG0042 | SAG1768 | Phosphosugar-binding transcriptional regulator, RpiR family; Identified by match to PFAM protein family HMM PF01380. | Glyceraldehyde 3-phosphate dehydrogenase; Identified by match to PFAM protein family HMM PF00044; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.620 |
| SAG0042 | glk | SAG0042 | SAG0471 | Phosphosugar-binding transcriptional regulator, RpiR family; Identified by match to PFAM protein family HMM PF01380. | Glucokinase; Identified by match to PFAM protein family HMM PF00480. | 0.455 |
| SAG0042 | pgi | SAG0042 | SAG0402 | Phosphosugar-binding transcriptional regulator, RpiR family; Identified by match to PFAM protein family HMM PF01380. | Glucose-6-phosphate isomerase; Identified by match to PFAM protein family HMM PF00342. | 0.711 |
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