STRINGSTRING
AIG73012.1 AIG73012.1 AIG73138.1 AIG73138.1 AIG73405.1 AIG73405.1 mdlC mdlC AIG73420.1 AIG73420.1 citA citA gltA2 gltA2 AIG73697.1 AIG73697.1 fumC fumC AIG73971.1 AIG73971.1 AIG73980.1 AIG73980.1 kgd kgd AIG74005.1 AIG74005.1 accA1 accA1 ilvX ilvX gabT1 gabT1 gabD gabD dmlA dmlA AIG74054.1 AIG74054.1 meaA meaA AIG74434.1 AIG74434.1 AIG74436.1 AIG74436.1 icl icl aceB1 aceB1 ilvD3 ilvD3 ilvB1 ilvB1 ilvH ilvH ilvC ilvC leuB leuB AIG74567.1 AIG74567.1 leuC leuC leuD leuD pyc pyc lipA1 lipA1 AIG74789.1 AIG74789.1 aceB2 aceB2 mtr mtr AIG74972.1 AIG74972.1 AIG74974.1 AIG74974.1 lldD lldD aceE aceE lipA2 lipA2 lipB lipB AIG75027.1 AIG75027.1 AIG75028.1 AIG75028.1 ilvE ilvE AIG75455.1 AIG75455.1 iolA1 iolA1 AIG75999.1 AIG75999.1 AIG76060.1 AIG76060.1 sucD1 sucD1 sucC1 sucC1 AIG76305.1 AIG76305.1 AIG76479.1 AIG76479.1 bkdB bkdB AIG76481.1 AIG76481.1 AIG76517.1 AIG76517.1 mdh mdh geoB1 geoB1 poxB poxB AIG76774.1 AIG76774.1 acnA acnA AIG76974.1 AIG76974.1 ilvD ilvD AIG77158.1 AIG77158.1 AIG77295.1 AIG77295.1 gabD2a gabD2a AIG77597.1 AIG77597.1 AIG77745.1 AIG77745.1 fumA fumA icmF icmF gabD2b gabD2b geoB2 geoB2 iolA2 iolA2 AIG78874.1 AIG78874.1 lpd lpd AIG78977.1 AIG78977.1 araC araC AIG79399.1 AIG79399.1 gabT2 gabT2 AIG79761.1 AIG79761.1 pccB pccB AIG79781.1 AIG79781.1 bccA bccA AIG79806.1 AIG79806.1 AIG79807.1 AIG79807.1 AIG79808.1 AIG79808.1 AIG79809.1 AIG79809.1 mutB mutB mutA mutA AIG79837.1 AIG79837.1 icd icd sucD2 sucD2 sucC2 sucC2 AIG79947.1 AIG79947.1 AIG80001.1 AIG80001.1 korA korA korB korB AIG80348.1 AIG80348.1 acsA acsA AIG80748.1 AIG80748.1 leuA leuA bkdA bkdA pdhB pdhB AIG81080.1 AIG81080.1 pckG pckG
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AIG73012.1Hypothetical protein; Belongs to the HpcH/HpaI aldolase family. (355 aa)
AIG73138.1Hypothetical protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (427 aa)
AIG73405.1Hypothetical protein; Belongs to the CutC family. (225 aa)
mdlCBenzoylformate decarboxylase; Belongs to the TPP enzyme family. (527 aa)
AIG73420.1NAD-dependent malic enzyme. (466 aa)
citAPutative citrate synthase 2; Belongs to the citrate synthase family. (383 aa)
gltA2Citrate synthase 1; Belongs to the citrate synthase family. (438 aa)
AIG73697.1Hypothetical protein. (623 aa)
fumCFumarate hydratase class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. (465 aa)
AIG73971.1NAD-dependent malic enzyme. (409 aa)
AIG73980.1SMP-30/Gluconolaconase/LRE domain protein. (262 aa)
kgdMultifunctional 2-oxoglutarate metabolism enzyme. (1240 aa)
AIG74005.1Methylcrotonoyl-CoA carboxylase beta chain. (537 aa)
accA1Acetyl-/propionyl-coenzyme A carboxylase alpha chain. (661 aa)
ilvXPutative acetolactate synthase large subunit IlvX. (520 aa)
gabT14-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (416 aa)
gabDSuccinate-semialdehyde dehydrogenase [NADP(+)] GabD; Belongs to the aldehyde dehydrogenase family. (487 aa)
dmlAD-malate dehydrogenase [decarboxylating]. (353 aa)
AIG74054.1Hypothetical protein; Belongs to the TPP enzyme family. (543 aa)
meaAProtein MeaA. (673 aa)
AIG74434.1Hypothetical protein. (149 aa)
AIG74436.1Putative GTPase. (322 aa)
iclIsocitrate lyase. (428 aa)
aceB1Malate synthase; Belongs to the malate synthase family. (534 aa)
ilvD3Dihydroxy-acid dehydratase 3; Belongs to the IlvD/Edd family. (614 aa)
ilvB1Acetolactate synthase large subunit IlvB1. (624 aa)
ilvHAcetolactate synthase small subunit. (168 aa)
ilvCKetol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate. (337 aa)
leuB3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate. Belongs to the isocitrate and isopropylmalate dehydrogenases family. LeuB type 2 subfamily. (347 aa)
AIG74567.1Putative AIPM/Hcit synthase family transferase; Belongs to the alpha-IPM synthase/homocitrate synthase family. (541 aa)
leuC3-isopropylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. (472 aa)
leuD3-isopropylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily. (200 aa)
pycPyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. (1125 aa)
lipA1Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. (333 aa)
AIG74789.16-phosphogluconate dehydrogenase. (288 aa)
aceB2Malate synthase; Belongs to the malate synthase family. (525 aa)
mtrMycothione reductase. (464 aa)
AIG74972.1Hypothetical protein. (242 aa)
AIG74974.1Hypothetical protein. (464 aa)
lldDPutative L-lactate dehydrogenase [cytochrome]. (403 aa)
aceEPyruvate dehydrogenase E1 component; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (931 aa)
lipA2Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. (333 aa)
lipBOctanoyltransferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. (247 aa)
AIG75027.1Hypothetical protein. (587 aa)
AIG75028.1Dihydrolipoyl dehydrogenase. (457 aa)
ilvEBranched-chain-amino-acid aminotransferase. (367 aa)
AIG75455.1Putative tartrate dehydrogenase/decarboxylase. (349 aa)
iolA1Methylmalonate semialdehyde dehydrogenase [acylating] 1. (494 aa)
AIG75999.1Hypothetical protein. (1149 aa)
AIG76060.1Hypothetical protein. (330 aa)
sucD1Succinyl-CoA ligase [ADP-forming] subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (292 aa)
sucC1Succinyl-CoA ligase [ADP-forming] subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. (387 aa)
AIG76305.1dicarboxylate-CoA ligase PimA. (541 aa)
AIG76479.1Hypothetical protein. (397 aa)
bkdB3-methyl-2-oxobutanoate dehydrogenase subunit beta. (332 aa)
AIG76481.1Hypothetical protein. (362 aa)
AIG76517.1Aldehyde dehydrogenase, dimeric NADP-preferring; Belongs to the aldehyde dehydrogenase family. (435 aa)
mdhMalate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. (329 aa)
geoB1Geranial dehydrogenase; Belongs to the aldehyde dehydrogenase family. (486 aa)
poxBPyruvate dehydrogenase [ubiquinone]; Belongs to the TPP enzyme family. (579 aa)
AIG76774.1Hypothetical protein. (170 aa)
acnAAconitate hydratase. (935 aa)
AIG76974.1Hypothetical protein. (567 aa)
ilvDDihydroxy-acid dehydratase; Belongs to the IlvD/Edd family. (559 aa)
AIG77158.1Hypothetical protein. (471 aa)
AIG77295.1Propionyl-CoA carboxylase beta chain. (521 aa)
gabD2aPutative succinate-semialdehyde dehydrogenase [NADP(+)]; Belongs to the aldehyde dehydrogenase family. (524 aa)
AIG77597.1Thiamine pyrophosphate protein; Belongs to the TPP enzyme family. (596 aa)
AIG77745.1Hypothetical protein. (650 aa)
fumAFumarate hydratase class I, aerobic; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. (552 aa)
icmFHypothetical protein; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly. (1078 aa)
gabD2bPutative succinate-semialdehyde dehydrogenase [NADP(+)] 2; Belongs to the aldehyde dehydrogenase family. (537 aa)
geoB2Geranial dehydrogenase; Belongs to the aldehyde dehydrogenase family. (481 aa)
iolA2Methylmalonate semialdehyde dehydrogenase [acylating] 2. (498 aa)
AIG78874.1Propionyl-CoA carboxylase beta chain. (567 aa)
lpdDihydrolipoyl dehydrogenase. (461 aa)
AIG78977.1Hypothetical protein. (387 aa)
araCL-arabonate dehydratase; Belongs to the IlvD/Edd family. (572 aa)
AIG79399.16-phosphogluconate dehydrogenase. (287 aa)
gabT24-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (443 aa)
AIG79761.1biotin-[acetyl-CoA-carboxylase] ligase. (274 aa)
pccBPropionyl-CoA carboxylase beta chain. (545 aa)
AIG79781.1Hypothetical protein. (72 aa)
bccAAcetyl-/propionyl-coenzyme A carboxylase alpha chain. (596 aa)
AIG79806.1Hypothetical protein. (290 aa)
AIG79807.1Carboxylate-amine ligase. (432 aa)
AIG79808.1Hypothetical protein. (99 aa)
AIG79809.1Putative GTPase. (332 aa)
mutBMethylmalonyl-CoA mutase large subunit. (722 aa)
mutAMethylmalonyl-CoA mutase small subunit. (625 aa)
AIG79837.1Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (477 aa)
icdIsocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family. (407 aa)
sucD2Succinyl-CoA ligase [ADP-forming] subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (295 aa)
sucC2Succinyl-CoA ligase [ADP-forming] subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. (389 aa)
AIG79947.1Hypothetical protein. (119 aa)
AIG80001.1Hypothetical protein. (473 aa)
korA2-oxoglutarate oxidoreductase subunit KorA. (635 aa)
korB2-oxoglutarate oxidoreductase subunit KorB. (354 aa)
AIG80348.1Hypothetical protein; Belongs to the TPP enzyme family. (540 aa)
acsAAcetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. (656 aa)
AIG80748.1Glutamate decarboxylase; Belongs to the group II decarboxylase family. (457 aa)
leuA2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily. (585 aa)
bkdA3-methyl-2-oxobutanoate dehydrogenase subunit alpha. (401 aa)
pdhBPyruvate dehydrogenase E1 component subunit beta. (330 aa)
AIG81080.1Pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase. (446 aa)
pckGPhosphoenolpyruvate carboxykinase [GTP]; Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle; Belongs to the phosphoenolpyruvate carboxykinase [GTP] family. (607 aa)
Your Current Organism:
Amycolatopsis japonica
NCBI taxonomy Id: 208439
Other names: A. japonica, Amycolatopsis japonicum, CIP 106801, DSM 44213, JCM 10140, NRRL B-24138, strain MG417-CF17
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