STRINGSTRING
kgd kgd AIG75027.1 AIG75027.1 AIG75028.1 AIG75028.1 AIG76479.1 AIG76479.1 bkdB bkdB AIG76481.1 AIG76481.1 lpd lpd bkdA bkdA pdhB pdhB AIG81080.1 AIG81080.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
kgdMultifunctional 2-oxoglutarate metabolism enzyme. (1240 aa)
AIG75027.1Hypothetical protein. (587 aa)
AIG75028.1Dihydrolipoyl dehydrogenase. (457 aa)
AIG76479.1Hypothetical protein. (397 aa)
bkdB3-methyl-2-oxobutanoate dehydrogenase subunit beta. (332 aa)
AIG76481.1Hypothetical protein. (362 aa)
lpdDihydrolipoyl dehydrogenase. (461 aa)
bkdA3-methyl-2-oxobutanoate dehydrogenase subunit alpha. (401 aa)
pdhBPyruvate dehydrogenase E1 component subunit beta. (330 aa)
AIG81080.1Pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase. (446 aa)
Your Current Organism:
Amycolatopsis japonica
NCBI taxonomy Id: 208439
Other names: A. japonica, Amycolatopsis japonicum, CIP 106801, DSM 44213, JCM 10140, NRRL B-24138, strain MG417-CF17
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