STRINGSTRING
AIG80577.1 AIG80577.1 AIG75644.1 AIG75644.1 araB araB AIG76334.1 AIG76334.1 araA araA rpe rpe mtnB mtnB AIG80586.1 AIG80586.1 xylB xylB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AIG80577.1L-fuculose phosphate aldolase. (216 aa)
AIG75644.1Xylulokinase; Belongs to the FGGY kinase family. (507 aa)
araBRibulokinase. (557 aa)
AIG76334.1Hypothetical protein. (228 aa)
araAL-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. (501 aa)
rpeRibulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. (227 aa)
mtnBHypothetical protein; Catalyzes the dehydration of methylthioribulose-1-phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P). Belongs to the aldolase class II family. MtnB subfamily. (210 aa)
AIG80586.1Carbohydrate kinase. (479 aa)
xylBXylulose kinase. (475 aa)
Your Current Organism:
Amycolatopsis japonica
NCBI taxonomy Id: 208439
Other names: A. japonica, Amycolatopsis japonicum, CIP 106801, DSM 44213, JCM 10140, NRRL B-24138, strain MG417-CF17
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