STRINGSTRING
AIG80912.1 AIG80912.1 AIG80077.1 AIG80077.1 AIG77683.1 AIG77683.1 AIG78146.1 AIG78146.1 AIG79836.1 AIG79836.1 AIG79184.1 AIG79184.1 AIG79549.1 AIG79549.1 AIG73379.1 AIG73379.1 alkB alkB AIG73613.1 AIG73613.1 AIG73956.1 AIG73956.1 AIG74014.1 AIG74014.1 AIG74423.1 AIG74423.1 iscS iscS pdxS pdxS AIG76668.1 AIG76668.1 AIG76727.1 AIG76727.1 AIG76803.1 AIG76803.1 AIG77232.1 AIG77232.1 AIG81050.1 AIG81050.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AIG80912.1Beta-lactamase-like protein. (211 aa)
AIG80077.1Hypothetical protein. (395 aa)
AIG77683.1Hypothetical protein. (208 aa)
AIG78146.1SNF2/RAD54 family helicase. (928 aa)
AIG79836.1Hypothetical protein; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate. (324 aa)
AIG79184.1Hypothetical protein. (391 aa)
AIG79549.1Hypothetical protein. (380 aa)
AIG73379.1Hypothetical protein; Belongs to the AAA ATPase family. (760 aa)
alkBAlkylated DNA repair protein. (212 aa)
AIG73613.1Hypothetical protein. (383 aa)
AIG73956.1Alpha/beta hydrolase. (202 aa)
AIG74014.1acyl-CoA dehydrogenase. (431 aa)
AIG74423.1Hypothetical protein; Belongs to the peptidase M20A family. (442 aa)
iscSCysteine desulfurase. (398 aa)
pdxSPyridoxal biosynthesis lyase PdxS; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family. (304 aa)
AIG76668.1Hypothetical protein. (905 aa)
AIG76727.1Hypothetical protein. (256 aa)
AIG76803.1Hypothetical protein. (260 aa)
AIG77232.1Hypothetical protein. (998 aa)
AIG81050.1G/U mismatch-specific DNA glycosylase. (183 aa)
Your Current Organism:
Amycolatopsis japonica
NCBI taxonomy Id: 208439
Other names: A. japonica, Amycolatopsis japonicum, CIP 106801, DSM 44213, JCM 10140, NRRL B-24138, strain MG417-CF17
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