STRINGSTRING
pth pth trcF trcF SMU_12 SMU_12 tilS tilS hprT hprT ftsH ftsH
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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textmining
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Your Input:
pthPutative peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. (189 aa)
trcFPutative transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. (1162 aa)
SMU_12Conserved hypothetical protein; Best Blastp Hit: pir||I39830 penicillin binding protein 5 - Bacillus subtilis (fragment) >gi|142817|gb|AAA22375.1| (M13766) penicillin binding protein 5 [Bacillus subtilis]. (404 aa)
tilSPutative cell-cycle protein; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family. (423 aa)
hprTBest Blastp Hit: sp|Q02522|HPRT_LACLA HYPOXANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE (HGPRT) (HGPRTASE) >gi|418760|pir||S30100 hypoxanthine phosphoribosyltransferase (EC 2.4.2.8) - Lactococcus lactis >gi|44026|emb|CAA48876.1| (X69123) hypoxanthine guanine phosphoribosyltransferase [Lactococcus lactis] >gi|49105|emb|CAA47404.1| (X67015) hypoxanthine phosphoribosyltransferase [Lactococcus lactis] >gi|384297|prf||1905381A hypoxanthine guanine phosphoribosyltransferase [Lactococcus lactis]. (180 aa)
ftsHPutative cell division protein FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. (656 aa)
Your Current Organism:
Streptococcus mutans
NCBI taxonomy Id: 210007
Other names: S. mutans UA159, Streptococcus mutans UA159, Streptococcus mutans str. UA159
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