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spoT spoT gppA gppA crp crp cyaC cyaC ppx ppx dgt dgt SO_2830 SO_2830 nrdG nrdG nrdD nrdD SO_2835 SO_2835 SO_2836 SO_2836 relA relA cyaB cyaB cpdA cpdA cyaA cyaA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
spoTBifunctional ppGpp phosphohydrolase/GTP diphosphokinase SpoT; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. (701 aa)
gppAGuanosine pentaphosphate phosphatase GppA. (306 aa)
crpcAMP-responsive regulator of catabolite repression Crp. (211 aa)
cyaCAdenylate cyclase CyaC. (355 aa)
ppxExopolyphosphatase Ppx; Belongs to the GppA/Ppx family. (518 aa)
dgtDeoxyguanosinetriphosphate triphosphohydrolase Dgt; Belongs to the dGTPase family. Type 2 subfamily. (441 aa)
SO_2830Predicted outer membrane protein. (310 aa)
nrdGAnaerobic ribonucleoside-triphosphate reductase activating protein NrdG; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine. (153 aa)
nrdDAnaerobic ribonucleoside-triphosphate reductase NrdD. (705 aa)
SO_2835Uncharacterized protein. (226 aa)
SO_2836Patatin-like phospholipase. (315 aa)
relAGTP pyrophosphokinase RelA; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. (735 aa)
cyaBCytoplasmic adenylate cyclase CyaB. (194 aa)
cpdACyclic 3', 5'-adenosine monophosphate phosphodiesterase CpdA; Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes. (278 aa)
cyaAAdenylate cyclase CyaA; Belongs to the adenylyl cyclase class-1 family. (804 aa)
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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