Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SO_1846 | SO_1848 | SO_1846 | SO_1848 | Uncharacterized protein. | Uncharacterized protein. | 0.979 |
| SO_1846 | SO_1849 | SO_1846 | SO_1849 | Uncharacterized protein. | Uncharacterized protein. | 0.979 |
| SO_1846 | SO_1850 | SO_1846 | SO_1850 | Uncharacterized protein. | DnaJ domain protein. | 0.955 |
| SO_1846 | djlA | SO_1846 | SO_3633 | Uncharacterized protein. | DnaK co-chaperone DjlA; Regulatory DnaK co-chaperone. Direct interaction between DnaK and DjlA is needed for the induction of the wcaABCDE operon, involved in the synthesis of a colanic acid polysaccharide capsule, possibly through activation of the RcsB/RcsC phosphotransfer signaling pathway. The colanic acid capsule may help the bacterium survive conditions outside the host. | 0.801 |
| SO_1848 | SO_1846 | SO_1848 | SO_1846 | Uncharacterized protein. | Uncharacterized protein. | 0.979 |
| SO_1848 | SO_1849 | SO_1848 | SO_1849 | Uncharacterized protein. | Uncharacterized protein. | 0.980 |
| SO_1848 | SO_1850 | SO_1848 | SO_1850 | Uncharacterized protein. | DnaJ domain protein. | 0.956 |
| SO_1848 | djlA | SO_1848 | SO_3633 | Uncharacterized protein. | DnaK co-chaperone DjlA; Regulatory DnaK co-chaperone. Direct interaction between DnaK and DjlA is needed for the induction of the wcaABCDE operon, involved in the synthesis of a colanic acid polysaccharide capsule, possibly through activation of the RcsB/RcsC phosphotransfer signaling pathway. The colanic acid capsule may help the bacterium survive conditions outside the host. | 0.801 |
| SO_1849 | SO_1846 | SO_1849 | SO_1846 | Uncharacterized protein. | Uncharacterized protein. | 0.979 |
| SO_1849 | SO_1848 | SO_1849 | SO_1848 | Uncharacterized protein. | Uncharacterized protein. | 0.980 |
| SO_1849 | SO_1850 | SO_1849 | SO_1850 | Uncharacterized protein. | DnaJ domain protein. | 0.956 |
| SO_1849 | djlA | SO_1849 | SO_3633 | Uncharacterized protein. | DnaK co-chaperone DjlA; Regulatory DnaK co-chaperone. Direct interaction between DnaK and DjlA is needed for the induction of the wcaABCDE operon, involved in the synthesis of a colanic acid polysaccharide capsule, possibly through activation of the RcsB/RcsC phosphotransfer signaling pathway. The colanic acid capsule may help the bacterium survive conditions outside the host. | 0.801 |
| SO_1850 | SO_1846 | SO_1850 | SO_1846 | DnaJ domain protein. | Uncharacterized protein. | 0.955 |
| SO_1850 | SO_1848 | SO_1850 | SO_1848 | DnaJ domain protein. | Uncharacterized protein. | 0.956 |
| SO_1850 | SO_1849 | SO_1850 | SO_1849 | DnaJ domain protein. | Uncharacterized protein. | 0.956 |
| SO_1850 | djlA | SO_1850 | SO_3633 | DnaJ domain protein. | DnaK co-chaperone DjlA; Regulatory DnaK co-chaperone. Direct interaction between DnaK and DjlA is needed for the induction of the wcaABCDE operon, involved in the synthesis of a colanic acid polysaccharide capsule, possibly through activation of the RcsB/RcsC phosphotransfer signaling pathway. The colanic acid capsule may help the bacterium survive conditions outside the host. | 0.821 |
| SO_1850 | hscA | SO_1850 | SO_2268 | DnaJ domain protein. | Chaperone protein HscA; Chaperone involved in the maturation of iron-sulfur cluster- containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB. | 0.964 |
| SO_1850 | hscB | SO_1850 | SO_2267 | DnaJ domain protein. | Co-chaperone Hsc20 HscB; Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA; Belongs to the HscB family. | 0.770 |
| SO_1850 | iscU | SO_1850 | SO_2265 | DnaJ domain protein. | FeS cluster assembly scaffold protein IscU; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters. | 0.524 |
| bolA | grxD | SO_1099 | SO_2880 | Global transcriptional regulator BolA; Belongs to the BolA/IbaG family. | Monothiol glutaredoxin GrxD; Belongs to the glutaredoxin family. Monothiol subfamily. | 0.979 |
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