STRINGSTRING
comFB comFB SO_1815 SO_1815 SO_1816 SO_1816 SO_1817 SO_1817 SO_1818 SO_1818
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
comFBLate competence development protein ComFB. (92 aa)
SO_1815Histone deacetylase superfamily protein. (304 aa)
SO_1816Periplasmic protein of unknown function DUF2057; Belongs to the UPF0319 family. (226 aa)
SO_1817Primosomal replication protein N'-like protein. (220 aa)
SO_18184-toluene sulfonate uptake permease family protein. (257 aa)
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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