STRINGSTRING
mtrF mtrF SO_1659 SO_1659 mtrC mtrC omcA omcA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
mtrFExtracellular respiratory system surface decaheme cytochrome c component MtrF. (639 aa)
SO_1659Surface localized decaheme cytochrome c lipoprotein. (759 aa)
mtrCExtracellular iron oxide respiratory system surface decaheme cytochrome c component MtrC. (671 aa)
omcAExtracelllular iron oxide respiratory system surface decaheme cytochrome c component OmcA. (735 aa)
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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