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| | APH_0019 | Cytochrome c oxidase, subunit III; Identified by match to protein family HMM PF00510. (285 aa) |
| | plsY | Conserved hypothetical protein TIGR00023; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP. (192 aa) |
| | APH_0003 | Putative ABC transporter, permease protein; Identified by similarity to GB:AAS14650.1; match to protein family HMM PF02405. (244 aa) |
| | rpe | Ribulose-phosphate 3-epimerase; Identified by match to protein family HMM PF00834; match to protein family HMM TIGR01163; Belongs to the ribulose-phosphate 3-epimerase family. (236 aa) |
| | APH_0994 | Conserved hypothetical protein; Identified by similarity to GB:AAS14796.1; Belongs to the DnaA family. (220 aa) |
| | APH_0986 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; Belongs to the ABC transporter superfamily. (342 aa) |
| | ubiB | 2-polyprenylphenol 6-hydroxylase; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. Belongs to the ABC1 family. UbiB subfamily. (483 aa) |
| | znuC | Putative cation ABC transporter, ATP-binding protein; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family. (220 aa) |
| | p44-C-7 | Silent p44 gene encodes a truncated P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus. (220 aa) |
| | pgpA | Phosphatidylglycerophosphatase A; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG). (166 aa) |
| | APH_0957 | CBS/transporter associated domain protein; Identified by match to protein family HMM PF00571; match to protein family HMM PF01595; match to protein family HMM PF03471. (422 aa) |
| | APH_0956 | Identified by match to protein family HMM PF02325. (92 aa) |
| | APH_0955 | Identified by match to protein family HMM PF01580; Belongs to the FtsK/SpoIIIE/SftA family. (835 aa) |
| | pleC | Sensor histidine kinase PleC; Name change according to the cited literature. PMID: 16882029. (470 aa) |
| | tolQ | TolQ protein; Identified by similarity to SP:P05828; match to protein family HMM PF01618. (234 aa) |
| | p44-C-4 | P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus. (115 aa) |
| | APH_0923 | Disulfide bond formation protein, DsbB family; Identified by match to protein family HMM PF02600. (157 aa) |
| | APH_0911 | Coq7 family protein; Belongs to the COQ7 family. (164 aa) |
| | p44-57 | P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus. (276 aa) |
| | APH_0895 | Putative transporter, truncated. (141 aa) |
| | APH_0878 | Putative membrane protein. (419 aa) |
| | APH_0848 | Major facilitator family transporter; Identified by match to protein family HMM PF00083. (425 aa) |
| | APH_0813 | ATP synthase F1, gamma subunit, truncated; Identified by match to protein family HMM PF00231. (183 aa) |
| | lepB | Signal peptidase I; Identified by similarity to SP:P26844; match to protein family HMM PF00717; match to protein family HMM TIGR02227; Belongs to the peptidase S26 family. (243 aa) |
| | nuoI | NADH dehydrogenase I, I subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (164 aa) |
| | lepA | GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner. (598 aa) |
| | nuoD | NADH dehydrogenase I, D subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family. (395 aa) |
| | nuoE | NADH dehydrogenase I, E subunit; Identified by similarity to GB:CAA71011.1; match to protein family HMM PF01257; match to protein family HMM TIGR01958. (171 aa) |
| | nuoG | NADH-quinone oxidoreductase, chain G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family. (692 aa) |
| | nuoH | NADH dehydrogenase I, H subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone. (340 aa) |
| | atpG | ATP synthase F1, gamma subunit; Identified by match to protein family HMM PF00231. (285 aa) |
| | APH_0687 | Cytochrome c biogenesis family protein; Possible subunit of a heme lyase. (135 aa) |
| | putA | Proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. (1045 aa) |
| | p44-72 | Encodes a full-length P44 outer membrane protein. (435 aa) |
| | p44-71 | Encodes a full-length P44 outer membrane protein. (429 aa) |
| | p44-70 | Encodes a full-length P44 outer membrane protein. (442 aa) |
| | mdh | Malate dehydrogenase, NAD-dependent; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. (321 aa) |
| | APH_0614 | Putative rod shape-determining protein; Identified by match to protein family HMM PF04085. (249 aa) |
| | APH_0612 | Putative membrane protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. (399 aa) |
| | APH_0611 | Putative membrane protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. (394 aa) |
| | APH_0608 | ppiC/parvulin rotamase family protein; Identified by similarity to SP:P77241. (601 aa) |
| | APH_0601 | Conserved hypothetical protein; Identified by similarity to GB:AAS13958.1. (87 aa) |
| | APH_0594 | Putative membrane protein. (210 aa) |
| | APH_0572 | DNA mismatch repair protein MutS, truncated; Identified by match to protein family HMM PF00488. (134 aa) |
| | APH_0561 | Putative thiol-disulfide oxidoreductase; Identified by similarity to SP:P35160. (210 aa) |
| | APH_0552 | Putative twin-arginine translocation protein TatB; Identified by similarity to SP:O69415; match to protein family HMM PF02416. (146 aa) |
| | psd | Putative phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). (227 aa) |
| | pssA | CDP-diacylglycerol--serine O-phosphatidyltransferase; Identified by match to protein family HMM PF01066; match to protein family HMM TIGR00473; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (264 aa) |
| | APH_0542 | Putative NADH-quinone oxidoreductase, degenerate; Peptides match to this protein was detected in human HL-60 cells by global proteomic analysis. (103 aa) |
| | ccmE | Cytochrome c-type biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family. (141 aa) |
| | nuoC | NADH dehydrogenase I, C subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family. (188 aa) |
| | nuoB | NADH dehydrogenase I, B subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (174 aa) |
| | nuoA | NADH dehydrogenase I, A subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family. (120 aa) |
| | APH_0511 | NADH dehydrogenase I, C subunit, truncated; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 30 kDa subunit family. (91 aa) |
| | atpD | ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. (479 aa) |
| | atpC | ATP synthase F1, epsilon subunit; Identified by match to protein family HMM PF02823. (128 aa) |
| | APH_0481 | Identified by match to protein family HMM PF03631; match to protein family HMM TIGR00765. (277 aa) |
| | dnaA | Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. (459 aa) |
| | APH_0449 | Integral membrane protein, TerC family; Identified by match to protein family HMM PF03741. (236 aa) |
| | APH_0444 | Transporter, AcrB/AcrD/AcrF family; Identified by match to protein family HMM PF00873; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1032 aa) |
| | tatC | Sec-independent protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. (241 aa) |
| | nuoN | NADH dehydrogenase I, N subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family. (464 aa) |
| | nuoM | NADH dehydrogenase I, M subunit; Identified by similarity to SP:P29925; match to protein family HMM PF00361; match to protein family HMM TIGR01972. (491 aa) |
| | nuoL | NADH dehydrogenase I, L subunit; Identified by similarity to SP:P29924; match to protein family HMM PF00361; match to protein family HMM PF00662; match to protein family HMM TIGR01974. (625 aa) |
| | nuoK | NADH dehydrogenase I, K subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family. (108 aa) |
| | nuoJ | NADH dehydrogenase I, J subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (201 aa) |
| | nuoF | NADH dehydrogenase I, F subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. (426 aa) |
| | APH_0424 | Identified by match to protein family HMM PF00375; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. (396 aa) |
| | petC | Ubiquinol-cytochrome c reductase, cytochrome c1; Identified by similarity to SP:P23135; match to protein family HMM PF02167. (250 aa) |
| | petB | Ubiquinol-cytochrome c reductase, cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (408 aa) |
| | petA | Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (189 aa) |
| | APH_0399 | ABC 3 transport family protein; Identified by match to protein family HMM PF00950. (264 aa) |
| | APH_0394 | Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (342 aa) |
| | APH_0392 | PQQ enzyme repeat domain protein. (407 aa) |
| | virB3 | Type IV secretion system protein VirB3; Identified by similarity to GB:AAM00406.1; match to protein family HMM PF05101. (97 aa) |
| | pstA | Phosphate ABC transporter, permease protein PtsA; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR00974. (448 aa) |
| | APH_0353 | Metallopeptidase, M24 family; Identified by match to protein family HMM PF00557. (569 aa) |
| | era | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. (305 aa) |
| | APH_0348 | Identified by match to protein family HMM PF00361. (506 aa) |
| | APH_0345 | Ribonuclease, Rne/Rng family; Identified by similarity to SP:P21513; match to protein family HMM PF00575; match to protein family HMM TIGR00757. (636 aa) |
| | APH_0338 | OmpA family protein; Identified by similarity to SP:P07176; match to protein family HMM PF00691. (205 aa) |
| | pstB | Phosphate ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; Belongs to the ABC transporter superfamily. (252 aa) |
| | ubiA | 4-hydroxybenzoate octaprenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate. (292 aa) |
| | APH_0307 | Identified by match to protein family HMM PF01235. (443 aa) |
| | APH_0306 | Identified by match to protein family HMM PF03772; match to protein family HMM TIGR00360. (705 aa) |
| | secY | Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. (434 aa) |
| | sppA | Signal peptide peptidase SppA, 36K type; Identified by match to protein family HMM PF01343; match to protein family HMM TIGR00706. (298 aa) |
| | APH_0262 | ATPase, AFG1 family; Identified by match to protein family HMM PF03969. (331 aa) |
| | APH_0260 | SPFH domain/band 7 family protein; Identified by match to protein family HMM PF01145. (284 aa) |
| | p44-C-3 | P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus. (56 aa) |
| | folK | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase; Identified by similarity to SP:P29252; match to protein family HMM PF01288; match to protein family HMM TIGR01498. (176 aa) |
| | APH_0181 | Identified by match to protein family HMM PF00361. (500 aa) |
| | p44-55 | P44-55 outer membrane protein, silent; Encodes a full-length P44 outer membrane protein. (326 aa) |
| | p44-C-2 | P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus. (67 aa) |
| | p44-45 | Encodes a full-length P44 outer membrane protein. (367 aa) |
| | ccmC | Heme exporter protein CcmC; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family. (235 aa) |
| | APH_0164 | Bicyclomycin resistance protein; Identified by similarity to SP:P28246; match to protein family HMM PF00083; match to protein family HMM PF07690; match to protein family HMM TIGR00710. (389 aa) |
| | sdhB-2 | Succinate dehydrogenase, iron-sulfur protein; Identified by match to protein family HMM PF00111; match to protein family HMM TIGR00384. (262 aa) |
| | sdhA-2 | Succinate dehydrogenase, flavoprotein subunit; Identified by similarity to SP:P31038; match to protein family HMM PF00890; match to protein family HMM PF02910; match to protein family HMM TIGR01812; match to protein family HMM TIGR01816; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (604 aa) |
| | sdhB-1 | Succinate dehydrogenase, iron-sulfur protein; Identified by match to protein family HMM PF00111; match to protein family HMM TIGR00384; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (262 aa) |
| | sdhA-1 | Succinate dehydrogenase, flavoprotein subunit; Identified by similarity to SP:P31038; match to protein family HMM PF00890; match to protein family HMM PF02910; match to protein family HMM TIGR01812; match to protein family HMM TIGR01816; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (604 aa) |
| | APH_0157 | Putative ABC transporter, ATP-binding protein/permease protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664. (578 aa) |
| | APH_0150 | Identified by match to protein family HMM PF02674. (199 aa) |
| | p44-N | P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus. (41 aa) |
| | p44-8 | Encodes a full-length P44 outer membrane protein. (335 aa) |
| | p44-C | P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus. (67 aa) |
| | p44-87 | P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus. (261 aa) |
| | ntrY | Nitrogen regulation protein/Sensor Histidine Kinase NtrY; Name change according to the cited literature. PMID: 16882029. (700 aa) |
| | ccmA | Heme exporter protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. (206 aa) |
| | APH_0113 | Putative phosphatidate cytidylyltransferase; Identified by match to protein family HMM PF01148. (235 aa) |
| | APH_0110 | Acetamidase/formamidase family protein. (999 aa) |
| | APH_0094 | Putative membrane protein; Identified by match to protein family HMM PF07690. (391 aa) |
| | APH_0078 | Putative oxidoreductase; Identified by match to protein family HMM PF04800. (102 aa) |
| | APH_0077 | Auxin efflux carrier family protein; Identified by match to protein family HMM PF03547. (307 aa) |
| | APH_0053 | Major facilitator family transporter; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690. (427 aa) |
| | APH_0046 | Conserved domain protein. (101 aa) |
| | APH_0045 | Identified by match to protein family HMM PF02470. (150 aa) |
| | APH_0044 | Identified by match to protein family HMM PF00361. (495 aa) |
| | APH_0043 | Conserved hypothetical protein; Identified by similarity to GB:AAS14671.1. (908 aa) |
| | APH_0041 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. (225 aa) |
| | secG | Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. (107 aa) |
| | p44-64 | P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus. (209 aa) |
| | p44-63 | P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus. (223 aa) |
| | APH_0021 | Putative hemolysin; Identified by similarity to SP:Q54318; match to protein family HMM PF00571; match to protein family HMM PF03471. (289 aa) |
| | p44-59 | P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus. (286 aa) |
| | p44-22 | P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus. (256 aa) |
| | APH_1397 | Putative heme exporter protein CcmB. (214 aa) |
| | APH_1395 | Cation efflux family protein; Identified by similarity to SP:P75757; match to protein family HMM PF01545; match to protein family HMM TIGR01297. (301 aa) |
| | p44-11 | Encodes a full-length P44 outer membrane protein. (379 aa) |
| | p44-9 | P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus; similar to HMM PF01617. (266 aa) |
| | p44-20 | Similar to outer membrane protein, MSP2 family (APH_1017); p44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus. (259 aa) |
| | mviN | Integral membrane protein MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane. (502 aa) |
| | lgt | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. (277 aa) |
| | APH_1373 | Identified by match to protein family HMM PF01553. (241 aa) |
| | secD | Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. (508 aa) |
| | APH_1361 | Major surface protein 2; Identified by match to protein family HMM PF01617. (365 aa) |
| | APH_1359 | Major outer membrane protein OMP-1A; Identified by match to protein family HMM PF01617. (290 aa) |
| | APH_1358 | Major outer membrane protein; Identified by similarity to GB:AAK28689.1; match to protein family HMM PF01617. (286 aa) |
| | p44-79 | Encodes a full-length P44 outer membrane protein. (461 aa) |
| | p44-30 | P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus; similar to HMM PF01617. (298 aa) |
| | p44-35 | P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus; similar to HMM PF01617. (277 aa) |
| | p44-51 | P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus. (322 aa) |
| | APH_1345 | Putative membrane protein; Identified by match to protein family HMM PF01027; Belongs to the BI1 family. (233 aa) |
| | p44-58 | P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus. (222 aa) |
| | APH_1341 | Lipoprotein releasing system, transmembrane protein, LolC/E family; Identified by match to protein family HMM PF02687; match to protein family HMM TIGR02212. (399 aa) |
| | atpH | ATP synthase F1, delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation; Belongs to the ATPase delta chain family. (180 aa) |
| | atpA | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. (506 aa) |
| | p44-29 | P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus. (220 aa) |
| | p44-60 | P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus. (251 aa) |
| | p44-17 | P44-17 outermembrane protein, silent; P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus. (206 aa) |
| | secF | Protein-export membrane protein SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. (305 aa) |
| | APH_1325 | Outer membrane protein, MSP2 family; Identified by match to protein family HMM PF01617. (416 aa) |
| | p44-26 | P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus. (273 aa) |
| | p44-5 | P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus; similar to HMM PF01617. (291 aa) |
| | p44-24 | Encodes a full-length P44 outer membrane protein. (397 aa) |
| | APH_1305 | Glutathione-regulated potassium-efflux system protein; Identified by similarity to SP:P45522; match to protein family HMM PF00999; match to protein family HMM PF02254; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. (571 aa) |
| | APH_1299 | Identified by similarity to SP:P34943; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF05368; match to protein family HMM PF07993. (313 aa) |
| | APH_1295 | Conserved domain protein. (99 aa) |
| | p44-32 | Encodes a full-length P44 outer membrane protein. (422 aa) |
| | p44-16b | P44 gene encodes a full-length P44 outer membrane protein. (428 aa) |
| | p44-25 | P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locusn; similar to HMM PF01617. (305 aa) |
| | p44-C-14 | P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus. (34 aa) |
| | p44-48 | P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus. (310 aa) |
| | APH_1271 | Cytochrome c-type biogenesis protein, CcmF/CycK/CcsA family; Identified by similarity to SP:P45403; match to protein family HMM PF01578. (637 aa) |
| | p44-16 | Encodes a full-length P44 outer membrane protein. (429 aa) |
| | p44-23 | Encodes a full-length P44 outer membrane protein. (395 aa) |
| | p44-10 | P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion; similar to protein family HMM PF01617. (268 aa) |
| | p44-39 | P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus. (267 aa) |
| | p44-12 | P44-12 outer membrane protein. (391 aa) |
| | p44-27 | P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus. (253 aa) |
| | p44-49 | P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus; similar to HMM PF01617. (331 aa) |
| | p44-33 | P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus. (226 aa) |
| | msp4 | Major surface protein 4; Identified by similarity to SP:Q07408; match to protein family HMM PF01617. (282 aa) |
| | p44-15b | Encodes a full-length P44 outer membrane protein. (364 aa) |
| | p44-13 | P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus. (372 aa) |
| | p44-2b | Encodes a full-length P44 outer membrane protein. (425 aa) |
| | ftsY | Signal recognition particle-docking protein FtsY; Identified by match to protein family HMM PF00448; match to protein family HMM PF02881; match to protein family HMM TIGR00064. (305 aa) |
| | p44-15 | P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus. (263 aa) |
| | p44-18ES | P44-18ES, P44 outer membrane protein expression locus with P44-18; Encodes a full-length P44 outer membrane protein. (431 aa) |
| | p44-14 | Encodes a full-length P44 outer membrane protein. (433 aa) |
| | APH_1214 | Identified by match to protein family HMM PF00768; match to protein family HMM PF07943; Belongs to the peptidase S11 family. (386 aa) |
| | APH_1213 | Thiol:disulfide interchange protein, truncated; Identified by similarity to GB:AAM35423.1. (402 aa) |
| | APH_1211 | Putative membrane-associated zinc metalloprotease; Identified by match to protein family HMM PF00595; match to protein family HMM PF02163; match to protein family HMM TIGR00054. (362 aa) |
| | bamA | Outer membrane protein, OMP85 family; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (772 aa) |
| | pgsA | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Identified by similarity to SP:P06978; match to protein family HMM PF01066; match to protein family HMM TIGR00560; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (181 aa) |
| | APH_1205 | Putative cytochrome c oxidase, subunit I. (420 aa) |
| | APH_1204 | Cytochrome c-type biogenesis protein, truncated; Identified by similarity to SP:P45403. (122 aa) |
| | p44-34b | P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus. (200 aa) |
| | p44-77 | P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus. (232 aa) |
| | p44-1 | Encodes a full-length P44 outer membrane protein. (413 aa) |
| | p44-18 | P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus. (252 aa) |
| | atpB | ATP synthase F0, A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. (242 aa) |
| | atpE | ATP synthase F0, C chain; Identified by match to protein family HMM PF00137. (74 aa) |
| | APH_1190 | Putative ATP synthase F0, B' subunit. (167 aa) |
| | APH_1189 | Putative ATP synthase F0, B subunit. (163 aa) |
| | p44-40 | P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus. (260 aa) |
| | ftsA-2 | Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. (406 aa) |
| | APH_1182 | Potassium uptake protein, TrkH family; Identified by similarity to GB:BAA31229.1; match to protein family HMM PF02386; match to protein family HMM PF07723. (486 aa) |
| | ftsH | ATP-dependent metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. (611 aa) |
| | secA | Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family. (873 aa) |
| | p44-54 | P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus. (230 aa) |
| | p44-2 | Encodes a full-length P44 outer membrane protein. (359 aa) |
| | APH_1171 | Conserved hypothetical protein; Identified by similarity to GB:AAS14894.1. (225 aa) |
| | p44-19 | P44-19 outer membrane protein, silent; Encodes a full-length P44 outer membrane protein. (316 aa) |
| | p44-36 | Encodes a full-length P44 outer membrane protein. (366 aa) |
| | ftsA-1 | Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. (394 aa) |
| | p44-53b | P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus; similar to HMM PF01617. (339 aa) |
| | lspA | Signal peptidase II; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family. (156 aa) |
| | p44-53 | Full-length P44 outer membrane protein. (419 aa) |
| | p44-47 | P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus. (291 aa) |
| | ctaG | Cytochrome c oxidase assembly protein CtaG; Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I; Belongs to the COX11/CtaG family. (183 aa) |
| | hflC | HflC protein; HflC and HflK could regulate a protease. (291 aa) |
| | p44-C-10 | P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus. (95 aa) |
| | p44-6 | P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus. (194 aa) |
| | p44-7b | P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus; similar to HMM PF01617. (316 aa) |
| | p44-7 | Encodes a full-length P44 outer membrane protein. (355 aa) |
| | APH_1111 | ATP-binding protein, Mrp/Nbp35 family; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. (342 aa) |
| | APH_1110 | Outer membrane efflux protein; Identified by match to protein family HMM PF02321. (424 aa) |
| | yajC | Preprotein translocase, YajC subunit; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions. (124 aa) |
| | bamD | Putative competence lipoprotein ComL; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (233 aa) |
| | cyoE | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. (296 aa) |
| | ctaD | Cytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. (518 aa) |
| | APH_1084 | Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). (262 aa) |
| | p44-28 | P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus; similar to HMM PF01617. (274 aa) |
| | p44-50 | P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus. (238 aa) |
| | p44-41 | P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus. (277 aa) |
| | p44-C-8 | P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus. (76 aa) |
| | p44-42 | Silent p44 gene encodes a truncated P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus. (203 aa) |
| | pstC | Phosphate ABC transporter, permease protein PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (307 aa) |
| | msp5 | Major surface protein 5; Identified by similarity to PIR:A49213; match to protein family HMM PF02630. (209 aa) |
| | APH_1045 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. (544 aa) |
| | APH_1043 | Type I secretion membrane fusion protein, HlyD family; Identified by match to protein family HMM PF00529; match to protein family HMM TIGR01843. (509 aa) |
| | APH_1040 | Putative cell division protein, degenerate; Likely degenerated ORF. Peptides match to this protein were not detected by global proteomic analysis. (73 aa) |
| | secE | Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. (66 aa) |
| | APH_1021 | Conserved hypothetical protein; Identified by similarity to GB:AAS13900.1. (147 aa) |
| | p44-62 | P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus. (250 aa) |
| | APH_1017 | Outer membrane protein, MSP2 family; Identified by match to protein family HMM PF01617. (423 aa) |
| | APH_1015 | Na+/H+ ion antiporter family protein; Identified by match to protein family HMM PF01899. (166 aa) |
| | sdhC | Succinate dehydrogenase, cytochrome b556 subunit; Identified by match to protein family HMM PF01127. (127 aa) |
| | sdhD | Succinate dehydrogenase, hydrophobic membrane anchor protein; Identified by similarity to GB:AAC17941.1. (109 aa) |
| | APH_0995 | Putative membrane protein; Identified by match to protein family HMM PF01594. (363 aa) |
