(33 nodes) Ubiquitin-dependent ERAD pathway, and Hedgehog ligand biogenesis network (Exophiala mesophila)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV10_08713	MPN domain-containing protein. (635 aa)
	PV10_07480	Uncharacterized protein. (708 aa)
	PV10_05820	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family. (260 aa)
	PV10_03996	Uncharacterized protein. (390 aa)
	PV10_00377	Uncharacterized protein. (841 aa)
	PV10_01937	ATPase_AAA_core domain-containing protein. (470 aa)
	PV10_08444	Uncharacterized protein. (809 aa)
	PV10_05559	Uncharacterized protein. (1166 aa)
	PV10_06162	UV excision repair protein Rad23. (398 aa)
	PV10_05283	Uncharacterized protein. (250 aa)
	PV10_03507	UBX domain-containing protein. (513 aa)
	PV10_00020	OTU domain-containing protein. (343 aa)
	PV10_01527	Uncharacterized protein. (188 aa)
	PV10_06930	Uncharacterized protein. (759 aa)
	PV10_07150	RING-type domain-containing protein. (887 aa)
	PV10_07902	Uncharacterized protein. (993 aa)
	PV10_05637	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family. (255 aa)
	PV10_05893	Uncharacterized protein. (813 aa)
	PV10_06527	PRKCSH domain-containing protein. (529 aa)
	PV10_05214	UBX domain-containing protein. (574 aa)
	PV10_05271	AAA domain-containing protein. (718 aa)
	PV10_04820	Uncharacterized protein. (368 aa)
	PV10_01952	TGc domain-containing protein. (442 aa)
	PV10_02235	Uncharacterized protein. (501 aa)
	PV10_02467	UBX domain-containing protein. (541 aa)
	PV10_08671	U-box domain-containing protein. (1093 aa)
	PV10_06770	Uncharacterized protein. (409 aa)
	PV10_03686	Uncharacterized protein. (317 aa)
	PV10_05190	Cell division control protein 48; Belongs to the AAA ATPase family. (840 aa)
	PV10_03127	Uncharacterized protein. (666 aa)
	PV10_03274	Uncharacterized protein. (114 aa)
	PV10_00486	RING-type domain-containing protein. (431 aa)
	PV10_01105	Uncharacterized protein. (928 aa)

Your Current Organism:

Exophiala mesophila

NCBI taxonomy Id: 212818
Other names: CBS 402.95, E. mesophila

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV10_00020	PV10_01937	A0A0D1Y626	A0A0D1X8E4	OTU domain-containing protein.	ATPase_AAA_core domain-containing protein.	0.954
PV10_00020	PV10_02235	A0A0D1Y626	A0A0D1ZKQ1	OTU domain-containing protein.	Uncharacterized protein.	0.608
PV10_00020	PV10_03274	A0A0D1Y626	A0A0D2A9K6	OTU domain-containing protein.	Uncharacterized protein.	0.797
PV10_00020	PV10_03507	A0A0D1Y626	A0A0D1Y5E3	OTU domain-containing protein.	UBX domain-containing protein.	0.472
PV10_00020	PV10_03996	A0A0D1Y626	A0A0D1WU15	OTU domain-containing protein.	Uncharacterized protein.	0.972
PV10_00020	PV10_05190	A0A0D1Y626	A0A0D2A4Y1	OTU domain-containing protein.	Cell division control protein 48; Belongs to the AAA ATPase family.	0.954
PV10_00020	PV10_05271	A0A0D1Y626	A0A0D1ZHN3	OTU domain-containing protein.	AAA domain-containing protein.	0.908
PV10_00020	PV10_05893	A0A0D1Y626	A0A0D1Z9E6	OTU domain-containing protein.	Uncharacterized protein.	0.971
PV10_00020	PV10_06162	A0A0D1Y626	A0A0D1XTY3	OTU domain-containing protein.	UV excision repair protein Rad23.	0.680
PV10_00020	PV10_06770	A0A0D1Y626	A0A0D1ZZR6	OTU domain-containing protein.	Uncharacterized protein.	0.966
PV10_00020	PV10_06930	A0A0D1Y626	A0A0D1Z469	OTU domain-containing protein.	Uncharacterized protein.	0.893
PV10_00020	PV10_07480	A0A0D1Y626	A0A0D1WMB1	OTU domain-containing protein.	Uncharacterized protein.	0.926
PV10_00020	PV10_08444	A0A0D1Y626	A0A0D1XKS5	OTU domain-containing protein.	Uncharacterized protein.	0.797
PV10_00020	PV10_08671	A0A0D1Y626	A0A0D1ZQM9	OTU domain-containing protein.	U-box domain-containing protein.	0.968
PV10_00020	PV10_08713	A0A0D1Y626	A0A0D1WJR2	OTU domain-containing protein.	MPN domain-containing protein.	0.967
PV10_00377	PV10_00486	A0A0D1X442	A0A0D2ACH1	Uncharacterized protein.	RING-type domain-containing protein.	0.721
PV10_00377	PV10_01527	A0A0D1X442	A0A0D1YB05	Uncharacterized protein.	Uncharacterized protein.	0.860
PV10_00377	PV10_01937	A0A0D1X442	A0A0D1X8E4	Uncharacterized protein.	ATPase_AAA_core domain-containing protein.	0.726
PV10_00377	PV10_03274	A0A0D1X442	A0A0D2A9K6	Uncharacterized protein.	Uncharacterized protein.	0.612
PV10_00377	PV10_03507	A0A0D1X442	A0A0D1Y5E3	Uncharacterized protein.	UBX domain-containing protein.	0.659