(25 nodes) Mixed, incl. Carbohydrate-binding WSC, and PCNA-Dependent Long Patch Base Excision Repair network (Exophiala mesophila)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV10_04951	Uncharacterized protein. (110 aa)
	PV10_05165	NTF2 domain-containing protein. (125 aa)
	PV10_09224	Uncharacterized protein. (205 aa)
	PV10_08293	Peroxidase; Belongs to the peroxidase family. (752 aa)
	PV10_06525	Uncharacterized protein. (571 aa)
	PV10_03866	Uncharacterized protein. (647 aa)
	PV10_04311	Uncharacterized protein. (580 aa)
	PV10_01957	TauD domain-containing protein. (375 aa)
	PV10_00035	WSC domain-containing protein. (284 aa)
	PV10_09124	Uncharacterized protein. (327 aa)
	PV10_08112	Uncharacterized protein. (158 aa)
	PV10_08402	Uncharacterized protein. (2470 aa)
	TRM5	tRNA (guanine(37)-N1)-methyltransferase; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5' of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding; Belongs to the TRM5 / TYW2 family. (485 aa)
	PV10_05368	WSC domain-containing protein. (406 aa)
	PV10_04579	Uncharacterized protein. (132 aa)
	PV10_03833	Uncharacterized protein. (223 aa)
	PV10_03883	Uncharacterized protein. (449 aa)
	PV10_04229	Uncharacterized protein. (444 aa)
	PV10_03146	Uncharacterized protein. (400 aa)
	PV10_00078	WSC domain-containing protein. (1140 aa)
	PV10_03916	Uncharacterized protein. (693 aa)
	PV10_05087	Uncharacterized protein. (409 aa)
	PV10_02020	Uncharacterized protein. (500 aa)
	PV10_02688	Uncharacterized protein. (507 aa)
	PV10_01051	Ubiquitin-like domain-containing protein. (720 aa)

Your Current Organism:

Exophiala mesophila

NCBI taxonomy Id: 212818
Other names: CBS 402.95, E. mesophila

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV10_00035	PV10_01051	A0A0D1Y636	A0A0D2AEE0	WSC domain-containing protein.	Ubiquitin-like domain-containing protein.	0.494
PV10_00035	PV10_02688	A0A0D1Y636	A0A0D2A7N4	WSC domain-containing protein.	Uncharacterized protein.	0.494
PV10_00035	PV10_03146	A0A0D1Y636	A0A0D1ZLP2	WSC domain-containing protein.	Uncharacterized protein.	0.618
PV10_00035	PV10_03833	A0A0D1Y636	A0A0D1ZFC6	WSC domain-containing protein.	Uncharacterized protein.	0.494
PV10_00035	PV10_03866	A0A0D1Y636	A0A0D1XWL6	WSC domain-containing protein.	Uncharacterized protein.	0.593
PV10_00035	PV10_03883	A0A0D1Y636	A0A0D1ZFG6	WSC domain-containing protein.	Uncharacterized protein.	0.618
PV10_00035	PV10_04229	A0A0D1Y636	A0A0D1ZGR5	WSC domain-containing protein.	Uncharacterized protein.	0.494
PV10_00035	PV10_04579	A0A0D1Y636	A0A0D1ZF32	WSC domain-containing protein.	Uncharacterized protein.	0.494
PV10_00035	PV10_05165	A0A0D1Y636	A0A0D1WXA6	WSC domain-containing protein.	NTF2 domain-containing protein.	0.691
PV10_00035	PV10_05368	A0A0D1Y636	A0A0D1Z7F2	WSC domain-containing protein.	WSC domain-containing protein.	0.826
PV10_00035	PV10_06525	A0A0D1Y636	A0A0D1XUZ7	WSC domain-containing protein.	Uncharacterized protein.	0.509
PV10_00035	PV10_08112	A0A0D1Y636	A0A0D1Z0U6	WSC domain-containing protein.	Uncharacterized protein.	0.494
PV10_00035	PV10_08402	A0A0D1Y636	A0A0D1Z1V7	WSC domain-containing protein.	Uncharacterized protein.	0.494
PV10_00035	PV10_09224	A0A0D1Y636	A0A0D1XIE4	WSC domain-containing protein.	Uncharacterized protein.	0.494
PV10_00035	TRM5	A0A0D1Y636	A0A0D1Z744	WSC domain-containing protein.	tRNA (guanine(37)-N1)-methyltransferase; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5' of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding; Belongs to the TRM5 / TYW2 family.	0.494
PV10_00078	PV10_01051	A0A0D1ZQC9	A0A0D2AEE0	WSC domain-containing protein.	Ubiquitin-like domain-containing protein.	0.494
PV10_00078	PV10_02688	A0A0D1ZQC9	A0A0D2A7N4	WSC domain-containing protein.	Uncharacterized protein.	0.494
PV10_00078	PV10_03146	A0A0D1ZQC9	A0A0D1ZLP2	WSC domain-containing protein.	Uncharacterized protein.	0.589
PV10_00078	PV10_03833	A0A0D1ZQC9	A0A0D1ZFC6	WSC domain-containing protein.	Uncharacterized protein.	0.494
PV10_00078	PV10_03866	A0A0D1ZQC9	A0A0D1XWL6	WSC domain-containing protein.	Uncharacterized protein.	0.443