STRINGSTRING
PV10_06298 PV10_06298 PV10_03715 PV10_03715 PV10_01007 PV10_01007 B0A52_07527 B0A52_07527 PV10_01503 PV10_01503 PV10_06418 PV10_06418 PV10_02677 PV10_02677
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PV10_06298Ribosomal RNA small subunit methyltransferase NEP1. (258 aa)
PV10_03715U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (281 aa)
PV10_01007CBF domain-containing protein. (290 aa)
B0A52_07527rRNA-processing protein FCF1. (193 aa)
PV10_01503WD_REPEATS_REGION domain-containing protein. (555 aa)
PV10_06418DRIM domain-containing protein. (2584 aa)
PV10_02677WD_REPEATS_REGION domain-containing protein. (440 aa)
Your Current Organism:
Exophiala mesophila
NCBI taxonomy Id: 212818
Other names: CBS 402.95, E. mesophila
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