(15 nodes) Mixed, incl. Prp19 complex, and AAA domain network (Exophiala mesophila)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV10_04109	Pre-mRNA-processing protein 45. (585 aa)
	PV10_04648	Pre-mRNA-splicing factor syf1. (862 aa)
	PV10_00642	Uncharacterized protein. (210 aa)
	PV10_08011	Pre-mRNA-splicing factor clf1. (675 aa)
	PV10_00293	Pre-mRNA-splicing factor slt11. (374 aa)
	PV10_07723	Uncharacterized protein. (327 aa)
	PV10_03744	Uncharacterized protein. (251 aa)
	PV10_04605	Uncharacterized protein. (773 aa)
	PV10_02811	Pre-mRNA-splicing factor cwc15. (229 aa)
	PV10_03604	DUF1716 domain-containing protein. (607 aa)
	PV10_01740	RRM domain-containing protein. (155 aa)
	PV10_05785	Uncharacterized protein. (155 aa)
	PV10_04514	Uncharacterized protein. (473 aa)
	PV10_04631	Pre-mRNA-splicing factor prp46. (441 aa)
	PV10_02427	Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome. (1419 aa)

Your Current Organism:

Exophiala mesophila

NCBI taxonomy Id: 212818
Other names: CBS 402.95, E. mesophila

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV10_00293	PV10_00642	A0A0D1Y6Q8	A0A0D1X4V0	Pre-mRNA-splicing factor slt11.	Uncharacterized protein.	0.948
PV10_00293	PV10_01740	A0A0D1Y6Q8	A0A0D1ZVP5	Pre-mRNA-splicing factor slt11.	RRM domain-containing protein.	0.997
PV10_00293	PV10_02427	A0A0D1Y6Q8	A0A0D2A6Q0	Pre-mRNA-splicing factor slt11.	Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome.	0.998
PV10_00293	PV10_02811	A0A0D1Y6Q8	A0A0D1ZMD8	Pre-mRNA-splicing factor slt11.	Pre-mRNA-splicing factor cwc15.	0.961
PV10_00293	PV10_03604	A0A0D1Y6Q8	A0A0D1ZN57	Pre-mRNA-splicing factor slt11.	DUF1716 domain-containing protein.	0.692
PV10_00293	PV10_03744	A0A0D1Y6Q8	A0A0D1ZCN7	Pre-mRNA-splicing factor slt11.	Uncharacterized protein.	0.999
PV10_00293	PV10_04109	A0A0D1Y6Q8	A0A0D1WUC2	Pre-mRNA-splicing factor slt11.	Pre-mRNA-processing protein 45.	0.999
PV10_00293	PV10_04514	A0A0D1Y6Q8	A0A0D2A2I9	Pre-mRNA-splicing factor slt11.	Uncharacterized protein.	0.984
PV10_00293	PV10_04605	A0A0D1Y6Q8	A0A0D1ZF68	Pre-mRNA-splicing factor slt11.	Uncharacterized protein.	0.989
PV10_00293	PV10_04631	A0A0D1Y6Q8	A0A0D2A313	Pre-mRNA-splicing factor slt11.	Pre-mRNA-splicing factor prp46.	0.989
PV10_00293	PV10_04648	A0A0D1Y6Q8	A0A0D1WVP4	Pre-mRNA-splicing factor slt11.	Pre-mRNA-splicing factor syf1.	0.999
PV10_00293	PV10_05785	A0A0D1Y6Q8	A0A0D1ZWN3	Pre-mRNA-splicing factor slt11.	Uncharacterized protein.	0.999
PV10_00293	PV10_07723	A0A0D1Y6Q8	A0A0D1Z8P2	Pre-mRNA-splicing factor slt11.	Uncharacterized protein.	0.977
PV10_00293	PV10_08011	A0A0D1Y6Q8	A0A0D1XJE7	Pre-mRNA-splicing factor slt11.	Pre-mRNA-splicing factor clf1.	0.999
PV10_00642	PV10_00293	A0A0D1X4V0	A0A0D1Y6Q8	Uncharacterized protein.	Pre-mRNA-splicing factor slt11.	0.948
PV10_00642	PV10_01740	A0A0D1X4V0	A0A0D1ZVP5	Uncharacterized protein.	RRM domain-containing protein.	0.900
PV10_00642	PV10_02427	A0A0D1X4V0	A0A0D2A6Q0	Uncharacterized protein.	Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome.	0.950
PV10_00642	PV10_02811	A0A0D1X4V0	A0A0D1ZMD8	Uncharacterized protein.	Pre-mRNA-splicing factor cwc15.	0.999
PV10_00642	PV10_03604	A0A0D1X4V0	A0A0D1ZN57	Uncharacterized protein.	DUF1716 domain-containing protein.	0.993
PV10_00642	PV10_03744	A0A0D1X4V0	A0A0D1ZCN7	Uncharacterized protein.	Uncharacterized protein.	0.865