(5 nodes) Heteroduplex DNA loop binding, and GYF domain network (Exophiala mesophila)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV10_01284	Helicase ATP-binding domain-containing protein. (470 aa)
	PV10_07327	Uncharacterized protein. (421 aa)
	PV10_03993	GYF domain-containing protein. (480 aa)
	PV10_00038	Uncharacterized protein. (654 aa)
	PV10_01283	SEC63 domain-containing protein. (615 aa)

Your Current Organism:

Exophiala mesophila

NCBI taxonomy Id: 212818
Other names: CBS 402.95, E. mesophila

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV10_00038	PV10_01283	A0A0D1ZQ97	A0A0D1ZUF1	Uncharacterized protein.	SEC63 domain-containing protein.	0.611
PV10_00038	PV10_01284	A0A0D1ZQ97	A0A0D1X6U7	Uncharacterized protein.	Helicase ATP-binding domain-containing protein.	0.611
PV10_00038	PV10_07327	A0A0D1ZQ97	A0A0D1XPF9	Uncharacterized protein.	Uncharacterized protein.	0.899
PV10_01283	PV10_00038	A0A0D1ZUF1	A0A0D1ZQ97	SEC63 domain-containing protein.	Uncharacterized protein.	0.611
PV10_01283	PV10_01284	A0A0D1ZUF1	A0A0D1X6U7	SEC63 domain-containing protein.	Helicase ATP-binding domain-containing protein.	0.899
PV10_01283	PV10_03993	A0A0D1ZUF1	A0A0D1ZDE3	SEC63 domain-containing protein.	GYF domain-containing protein.	0.728
PV10_01283	PV10_07327	A0A0D1ZUF1	A0A0D1XPF9	SEC63 domain-containing protein.	Uncharacterized protein.	0.604
PV10_01284	PV10_00038	A0A0D1X6U7	A0A0D1ZQ97	Helicase ATP-binding domain-containing protein.	Uncharacterized protein.	0.611
PV10_01284	PV10_01283	A0A0D1X6U7	A0A0D1ZUF1	Helicase ATP-binding domain-containing protein.	SEC63 domain-containing protein.	0.899
PV10_01284	PV10_03993	A0A0D1X6U7	A0A0D1ZDE3	Helicase ATP-binding domain-containing protein.	GYF domain-containing protein.	0.728
PV10_01284	PV10_07327	A0A0D1X6U7	A0A0D1XPF9	Helicase ATP-binding domain-containing protein.	Uncharacterized protein.	0.604
PV10_03993	PV10_01283	A0A0D1ZDE3	A0A0D1ZUF1	GYF domain-containing protein.	SEC63 domain-containing protein.	0.728
PV10_03993	PV10_01284	A0A0D1ZDE3	A0A0D1X6U7	GYF domain-containing protein.	Helicase ATP-binding domain-containing protein.	0.728
PV10_03993	PV10_07327	A0A0D1ZDE3	A0A0D1XPF9	GYF domain-containing protein.	Uncharacterized protein.	0.813
PV10_07327	PV10_00038	A0A0D1XPF9	A0A0D1ZQ97	Uncharacterized protein.	Uncharacterized protein.	0.899
PV10_07327	PV10_01283	A0A0D1XPF9	A0A0D1ZUF1	Uncharacterized protein.	SEC63 domain-containing protein.	0.604
PV10_07327	PV10_01284	A0A0D1XPF9	A0A0D1X6U7	Uncharacterized protein.	Helicase ATP-binding domain-containing protein.	0.604
PV10_07327	PV10_03993	A0A0D1XPF9	A0A0D1ZDE3	Uncharacterized protein.	GYF domain-containing protein.	0.813