65 items (Exophiala mesophila) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV10_09228	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family. (300 aa)
	PV10_08095	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (697 aa)
	PV10_08198	Uncharacterized protein. (440 aa)
	PV10_08709	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (457 aa)
	PV10_08944	Uncharacterized protein. (584 aa)
	PV10_07069	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (411 aa)
	PV10_07427	Uncharacterized protein. (269 aa)
	B0A52_06985	Isovaleryl-CoA dehydrogenase, mitochondrial. (435 aa)
	PV10_05981	Uncharacterized protein. (288 aa)
	B0A52_05137	Electron transfer flavoprotein subunit beta. (255 aa)
	B0A52_02437	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family. (249 aa)
	PV10_03769	Uncharacterized protein. (434 aa)
	PV10_04350	Uncharacterized protein. (452 aa)
	PV10_05138	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family. (282 aa)
	PV10_02723	Uncharacterized protein. (404 aa)
	PV10_03612	Zn(2)-C6 fungal-type domain-containing protein. (673 aa)
	PV10_00368	Uncharacterized protein. (283 aa)
	PV10_01062	Uncharacterized protein. (218 aa)
	PV10_01576	Uncharacterized protein. (318 aa)
	PV10_07644	TPR_REGION domain-containing protein. (649 aa)
	PV10_05787	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (429 aa)
	PV10_06144	Uncharacterized protein. (730 aa)
	PV10_06253	Uncharacterized protein. (675 aa)
	PV10_04428	Uncharacterized protein. (196 aa)
	B0A52_09447	MaoC-like domain-containing protein. (311 aa)
	PV10_02617	Uncharacterized protein. (316 aa)
	PV10_02913	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (437 aa)
	PV10_03246	SH3 domain-containing protein. (480 aa)
	PV10_00283	Uncharacterized protein. (331 aa)
	PV10_00919	ETF domain-containing protein. (349 aa)
	PV10_01108	Uncharacterized protein. (477 aa)
	PV10_01350	Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone. (631 aa)
	PV10_01484	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (421 aa)
	PV10_09051	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (421 aa)
	PV10_08325	Uncharacterized protein. (275 aa)
	PV10_08729	Fungal_trans domain-containing protein. (541 aa)
	PV10_07160	Uncharacterized protein. (321 aa)
	PV10_07000	Uncharacterized protein. (322 aa)
	PV10_06181	RING-type domain-containing protein. (398 aa)
	PV10_06264	Zn(2)-C6 fungal-type domain-containing protein. (782 aa)
	PV10_05823	Uncharacterized protein. (569 aa)
	PV10_03813	Uncharacterized protein. (373 aa)
	PV10_04375	Uncharacterized protein. (655 aa)
	PV10_04867	Uncharacterized protein. (318 aa)
	PV10_04837	Pex2_Pex12 domain-containing protein. (469 aa)
	PV10_02354	Cytochrome b5 heme-binding domain-containing protein. (552 aa)
	PV10_02519	Uncharacterized protein. (572 aa)
	PV10_02853	Uncharacterized protein. (500 aa)
	PV10_02850	Uncharacterized protein. (306 aa)
	PV10_03235	Fungal_trans domain-containing protein. (649 aa)
	PV10_08263	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (461 aa)
	PV10_00754	Uncharacterized protein. (304 aa)
	PV10_00764	Uncharacterized protein. (282 aa)
	PV10_01333	MaoC-like domain-containing protein. (335 aa)
	PV10_01472	Uncharacterized protein. (265 aa)
	PV10_06409	Uncharacterized protein. (316 aa)
	PV10_02520	Uncharacterized protein. (881 aa)
	PV10_02550	Pex14_N domain-containing protein. (377 aa)
	PV10_03158	Uncharacterized protein. (426 aa)
	PV10_03404	Uncharacterized protein. (448 aa)
	B0A52_06643	SCP2 domain-containing protein. (129 aa)
	PV10_00589	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (460 aa)
	PV10_00645	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (698 aa)
	PV10_00873	Uncharacterized protein. (352 aa)
	PV10_01200	Uncharacterized protein. (319 aa)

Your Current Organism:

Exophiala mesophila

NCBI taxonomy Id: 212818
Other names: CBS 402.95, E. mesophila

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B0A52_02437	B0A52_05137	A0A0D1WS27	A0A0D1WQU6	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	Electron transfer flavoprotein subunit beta.	0.687
B0A52_02437	B0A52_06643	A0A0D1WS27	A0A0D2AAY2	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	SCP2 domain-containing protein.	0.909
B0A52_02437	B0A52_06985	A0A0D1WS27	A0A0D1WPA4	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	Isovaleryl-CoA dehydrogenase, mitochondrial.	0.660
B0A52_02437	B0A52_09447	A0A0D1WS27	A0A0D1Y2Q2	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	MaoC-like domain-containing protein.	0.627
B0A52_02437	PV10_00283	A0A0D1WS27	A0A0D1Y6P7	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	Uncharacterized protein.	0.608
B0A52_02437	PV10_00368	A0A0D1WS27	A0A0D1X430	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	Uncharacterized protein.	0.627
B0A52_02437	PV10_00589	A0A0D1WS27	A0A0D2ACU1	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.928
B0A52_02437	PV10_00645	A0A0D1WS27	A0A0D2AD18	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.881
B0A52_02437	PV10_00754	A0A0D1WS27	A0A0D1ZQT4	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	Uncharacterized protein.	0.531
B0A52_02437	PV10_00764	A0A0D1WS27	A0A0D1ZST4	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	Uncharacterized protein.	0.627
B0A52_02437	PV10_00873	A0A0D1WS27	A0A0D2ADY5	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	Uncharacterized protein.	0.611
B0A52_02437	PV10_00919	A0A0D1WS27	A0A0D1Y8Y9	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	ETF domain-containing protein.	0.674
B0A52_02437	PV10_01062	A0A0D1WS27	A0A0D1X655	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	Uncharacterized protein.	0.934
B0A52_02437	PV10_01108	A0A0D1WS27	A0A0D1Y9J0	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	Uncharacterized protein.	0.608
B0A52_02437	PV10_01200	A0A0D1WS27	A0A0D2AEW3	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	Uncharacterized protein.	0.914
B0A52_02437	PV10_01333	A0A0D1WS27	A0A0D1ZUJ6	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	MaoC-like domain-containing protein.	0.627
B0A52_02437	PV10_01472	A0A0D1WS27	A0A0D1ZUV3	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	Uncharacterized protein.	0.726
B0A52_02437	PV10_01484	A0A0D1WS27	A0A0D1YAV5	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.822
B0A52_02437	PV10_01576	A0A0D1WS27	A0A0D1X7N4	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	Uncharacterized protein.	0.801
B0A52_02437	PV10_02354	A0A0D1WS27	A0A0D1ZJ36	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	Cytochrome b5 heme-binding domain-containing protein.	0.790