11 items (Exophiala mesophila) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV10_06669	Glutamine synthetase. (365 aa)
	PV10_00057	Glutamate-5-semialdehyde dehydrogenase. (479 aa)
	PV10_00577	Glutamate 5-kinase. (463 aa)
	PV10_08144	Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (457 aa)
	PV10_04316	Glutamine amidotransferase type-2 domain-containing protein. (2135 aa)
	PV10_04409	NAD-specific glutamate dehydrogenase; NAD(+)-dependent glutamate dehydrogenase which degrades glutamate to ammonia and alpha-ketoglutarate. Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (1069 aa)
	PV10_08039	Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family. (582 aa)
	PV10_06994	Glutaminase A. (465 aa)
	PV10_01652	NADPH:adrenodoxin oxidoreductase, mitochondrial. (524 aa)
	PV10_05441	Gln-synt_C domain-containing protein; Belongs to the glutamine synthetase family. (489 aa)
	PV10_03463	Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate. (507 aa)

Your Current Organism:

Exophiala mesophila

NCBI taxonomy Id: 212818
Other names: CBS 402.95, E. mesophila

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV10_00057	PV10_00577	A0A0D1X314	A0A0D1X4N5	Glutamate-5-semialdehyde dehydrogenase.	Glutamate 5-kinase.	0.998
PV10_00057	PV10_01652	A0A0D1X314	A0A0D1ZTT3	Glutamate-5-semialdehyde dehydrogenase.	NADPH:adrenodoxin oxidoreductase, mitochondrial.	0.826
PV10_00057	PV10_03463	A0A0D1X314	A0A0D2AAA0	Glutamate-5-semialdehyde dehydrogenase.	Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.	0.810
PV10_00057	PV10_04316	A0A0D1X314	A0A0D1XXY6	Glutamate-5-semialdehyde dehydrogenase.	Glutamine amidotransferase type-2 domain-containing protein.	0.863
PV10_00057	PV10_04409	A0A0D1X314	A0A0D1ZEM6	Glutamate-5-semialdehyde dehydrogenase.	NAD-specific glutamate dehydrogenase; NAD(+)-dependent glutamate dehydrogenase which degrades glutamate to ammonia and alpha-ketoglutarate. Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	0.842
PV10_00057	PV10_05441	A0A0D1X314	A0A0D1ZVI1	Glutamate-5-semialdehyde dehydrogenase.	Gln-synt_C domain-containing protein; Belongs to the glutamine synthetase family.	0.825
PV10_00057	PV10_06669	A0A0D1X314	A0A0D1WSQ2	Glutamate-5-semialdehyde dehydrogenase.	Glutamine synthetase.	0.825
PV10_00057	PV10_06994	A0A0D1X314	A0A0D1ZS59	Glutamate-5-semialdehyde dehydrogenase.	Glutaminase A.	0.776
PV10_00057	PV10_08039	A0A0D1X314	A0A0D1ZNH5	Glutamate-5-semialdehyde dehydrogenase.	Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family.	0.854
PV10_00057	PV10_08144	A0A0D1X314	A0A0D1XJT8	Glutamate-5-semialdehyde dehydrogenase.	Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	0.842
PV10_00577	PV10_00057	A0A0D1X4N5	A0A0D1X314	Glutamate 5-kinase.	Glutamate-5-semialdehyde dehydrogenase.	0.998
PV10_00577	PV10_01652	A0A0D1X4N5	A0A0D1ZTT3	Glutamate 5-kinase.	NADPH:adrenodoxin oxidoreductase, mitochondrial.	0.858
PV10_00577	PV10_03463	A0A0D1X4N5	A0A0D2AAA0	Glutamate 5-kinase.	Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.	0.830
PV10_00577	PV10_04316	A0A0D1X4N5	A0A0D1XXY6	Glutamate 5-kinase.	Glutamine amidotransferase type-2 domain-containing protein.	0.877
PV10_00577	PV10_04409	A0A0D1X4N5	A0A0D1ZEM6	Glutamate 5-kinase.	NAD-specific glutamate dehydrogenase; NAD(+)-dependent glutamate dehydrogenase which degrades glutamate to ammonia and alpha-ketoglutarate. Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	0.810
PV10_00577	PV10_05441	A0A0D1X4N5	A0A0D1ZVI1	Glutamate 5-kinase.	Gln-synt_C domain-containing protein; Belongs to the glutamine synthetase family.	0.642
PV10_00577	PV10_06669	A0A0D1X4N5	A0A0D1WSQ2	Glutamate 5-kinase.	Glutamine synthetase.	0.642
PV10_00577	PV10_08039	A0A0D1X4N5	A0A0D1ZNH5	Glutamate 5-kinase.	Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family.	0.853
PV10_00577	PV10_08144	A0A0D1X4N5	A0A0D1XJT8	Glutamate 5-kinase.	Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	0.810
PV10_01652	PV10_00057	A0A0D1ZTT3	A0A0D1X314	NADPH:adrenodoxin oxidoreductase, mitochondrial.	Glutamate-5-semialdehyde dehydrogenase.	0.826