STRINGSTRING
PV10_01705 PV10_01705 PV10_01232 PV10_01232 PV10_01126 PV10_01126 PV10_00383 PV10_00383 PV10_03222 PV10_03222 PV10_02944 PV10_02944 PV10_02899 PV10_02899 PV10_03573 PV10_03573 PV10_00060 PV10_00060 PV10_00085 PV10_00085 PV10_00579 PV10_00579 LSM4 LSM4 PV10_01177 PV10_01177 PV10_01271 PV10_01271 PV10_01566 PV10_01566 PV10_01897 PV10_01897 PV10_07951 PV10_07951 PV10_01265 PV10_01265 PV10_02022 PV10_02022 B0A52_05389 B0A52_05389 PV10_04997 PV10_04997 B0A52_08158 B0A52_08158 PV10_04905 PV10_04905 PV10_04721 PV10_04721 PV10_04648 PV10_04648 PV10_04520 PV10_04520 PV10_04109 PV10_04109 PV10_06286 PV10_06286 PV10_05915 PV10_05915 PV10_05810 PV10_05810 B0A52_05749 B0A52_05749 PV10_07757 PV10_07757 PV10_07355 PV10_07355 PV10_07318 PV10_07318 PV10_07304 PV10_07304 PV10_07001 PV10_07001 PV10_06976 PV10_06976 PV10_06918 PV10_06918 PV10_08639 PV10_08639 PV10_08599 PV10_08599 PV10_02680 PV10_02680 PV10_02508 PV10_02508 PV10_02013 PV10_02013 PV10_04502 PV10_04502 B0A52_09139 B0A52_09139 PV10_03997 PV10_03997 PV10_03701 PV10_03701 PV10_03684 PV10_03684 PV10_06654 PV10_06654 PV10_05410 PV10_05410 PV10_05389 PV10_05389 PV10_07725 PV10_07725 PV10_07499 PV10_07499 PV10_07452 PV10_07452 PV10_07423 PV10_07423 PV10_07327 PV10_07327 PV10_06919 PV10_06919 PV10_08907 PV10_08907 PV10_08073 PV10_08073 PV10_08011 PV10_08011 PV10_01325 PV10_01325 PV10_00642 PV10_00642 PV10_00182 PV10_00182 B0A52_07148 B0A52_07148 LSM5 LSM5 PV10_02866 PV10_02866 PV10_02820 PV10_02820 PV10_02366 PV10_02366 PV10_02919 PV10_02919 PV10_02697 PV10_02697 PV10_02427 PV10_02427 LSM3 LSM3 PV10_04646 PV10_04646 PV10_04631 PV10_04631 PV10_03028 PV10_03028 PV10_04514 PV10_04514 PV10_06507 PV10_06507 PV10_06419 PV10_06419 PV10_06060 PV10_06060 PV10_05785 PV10_05785 PV10_05775 PV10_05775 PV10_01497 PV10_01497 PV10_07861 PV10_07861 PV10_01386 PV10_01386 PV10_01076 PV10_01076 PV10_01557 PV10_01557 PV10_00732 PV10_00732 PV10_00555 PV10_00555 PV10_00404 PV10_00404 PV10_00954 PV10_00954 PV10_08904 PV10_08904 PV10_00038 PV10_00038 PV10_03578 PV10_03578 PV10_03505 PV10_03505 PV10_08258 PV10_08258 LSM8 LSM8 PV10_03284 PV10_03284 PV10_08030 PV10_08030 PV10_08025 PV10_08025 PV10_03083 PV10_03083 PV10_03604 PV10_03604 PV10_08998 PV10_08998 PV10_02811 PV10_02811 PV10_02685 PV10_02685 PV10_02016 PV10_02016 PV10_01955 PV10_01955 PV10_02363 PV10_02363 B0A52_09991 B0A52_09991 PV10_04919 PV10_04919 B0A52_01428 B0A52_01428 PV10_05262 PV10_05262 PV10_05171 PV10_05171 PV10_04345 PV10_04345 PV10_05086 PV10_05086 PV10_04877 PV10_04877 PV10_06657 PV10_06657 PV10_06548 PV10_06548 PV10_03803 PV10_03803 PV10_03744 PV10_03744 PV10_06719 PV10_06719 PV10_06403 PV10_06403 PV10_05684 PV10_05684 PV10_05877 PV10_05877 PV10_05868 PV10_05868 PV10_07852 PV10_07852 PV10_05826 PV10_05826 PV10_07460 PV10_07460 PV10_07278 PV10_07278 PV10_05343 PV10_05343 PV10_07570 PV10_07570 PV10_07523 PV10_07523 PV10_08546 PV10_08546 PV10_08223 PV10_08223 PV10_08215 PV10_08215 PV10_08855 PV10_08855 PV10_08984 PV10_08984 PV10_08188 PV10_08188 PV10_08116 PV10_08116 PV10_08012 PV10_08012
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PV10_01705Protein kinase domain-containing protein. (160 aa)
PV10_01232Matrin-type domain-containing protein. (520 aa)
PV10_01126Uncharacterized protein. (386 aa)
PV10_00383Uncharacterized protein. (89 aa)
PV10_03222Uncharacterized protein. (978 aa)
PV10_02944PSP domain-containing protein. (576 aa)
PV10_02899Uncharacterized protein. (660 aa)
PV10_03573Uncharacterized protein. (544 aa)
PV10_00060RRM domain-containing protein. (214 aa)
PV10_00085SF3b1 domain-containing protein. (1213 aa)
PV10_00579FHA domain-containing protein. (375 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (127 aa)
PV10_01177Uncharacterized protein. (563 aa)
PV10_01271Sde2_N_Ubi domain-containing protein. (340 aa)
PV10_01566Slu7 domain-containing protein. (514 aa)
PV10_01897Uncharacterized protein. (336 aa)
PV10_07951G-patch domain-containing protein. (715 aa)
PV10_01265Branchpoint-bridging protein. (587 aa)
PV10_02022WD_REPEATS_REGION domain-containing protein. (573 aa)
B0A52_05389Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family. (143 aa)
PV10_04997Uncharacterized protein. (377 aa)
B0A52_08158Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (92 aa)
PV10_04905J domain-containing protein. (212 aa)
PV10_04721Uncharacterized protein. (1241 aa)
PV10_04648Pre-mRNA-splicing factor syf1. (862 aa)
PV10_04520RRM domain-containing protein. (401 aa)
PV10_04109Pre-mRNA-processing protein 45. (585 aa)
PV10_06286WD_REPEATS_REGION domain-containing protein. (519 aa)
PV10_05915RRM domain-containing protein. (279 aa)
PV10_05810Uncharacterized protein. (526 aa)
B0A52_05749PHD finger-like domain-containing protein 5A. (109 aa)
PV10_07757Pre-mRNA-splicing factor cwc22. (943 aa)
PV10_07355RRM domain-containing protein. (331 aa)
PV10_07318Uncharacterized protein. (768 aa)
PV10_07304Uncharacterized protein. (380 aa)
PV10_07001C2H2-type domain-containing protein. (159 aa)
PV10_06976PCI domain-containing protein. (548 aa)
PV10_06918Uncharacterized protein. (496 aa)
PV10_08639RRM domain-containing protein. (405 aa)
PV10_08599Cir_N domain-containing protein. (425 aa)
PV10_02680Uncharacterized protein. (578 aa)
PV10_02508C2H2-type domain-containing protein. (216 aa)
PV10_02013Uncharacterized protein. (560 aa)
PV10_04502MFAP1 domain-containing protein. (547 aa)
B0A52_09139RRM domain-containing protein. (116 aa)
PV10_03997WD_REPEATS_REGION domain-containing protein. (365 aa)
PV10_03701Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (125 aa)
PV10_03684RRM domain-containing protein. (173 aa)
PV10_06654Tr-type G domain-containing protein. (982 aa)
PV10_05410Uncharacterized protein. (324 aa)
PV10_05389Uncharacterized protein. (336 aa)
PV10_07725Uncharacterized protein. (479 aa)
PV10_07499RRM domain-containing protein. (332 aa)
PV10_07452Uncharacterized protein. (399 aa)
PV10_07423Uncharacterized protein. (383 aa)
PV10_07327Uncharacterized protein. (421 aa)
PV10_06919Small nuclear ribonucleoprotein G. (81 aa)
PV10_08907Uncharacterized protein. (734 aa)
PV10_08073Uncharacterized protein. (156 aa)
PV10_08011Pre-mRNA-splicing factor clf1. (675 aa)
PV10_01325Uncharacterized protein. (379 aa)
PV10_00642Uncharacterized protein. (210 aa)
PV10_00182Uncharacterized protein. (1287 aa)
B0A52_07148U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (84 aa)
PV10_02866Uncharacterized protein. (235 aa)
PV10_02820Uncharacterized protein. (311 aa)
PV10_02366G-patch_2 domain-containing protein. (472 aa)
PV10_02919Uncharacterized protein. (301 aa)
PV10_02697CID domain-containing protein. (859 aa)
PV10_02427Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome. (1419 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
PV10_04646Uncharacterized protein. (252 aa)
PV10_04631Pre-mRNA-splicing factor prp46. (441 aa)
PV10_03028RRM domain-containing protein. (200 aa)
PV10_04514Uncharacterized protein. (473 aa)
PV10_06507Tudor domain-containing protein. (299 aa)
PV10_06419Uncharacterized protein. (560 aa)
PV10_06060Uncharacterized protein. (428 aa)
PV10_05785Uncharacterized protein. (155 aa)
PV10_05775KH domain-containing protein. (488 aa)
PV10_01497G-patch domain-containing protein. (681 aa)
PV10_07861Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. (132 aa)
PV10_01386Pre-mRNA-splicing factor rse1. (1211 aa)
PV10_01076Uncharacterized protein. (209 aa)
PV10_01557Uncharacterized protein. (621 aa)
PV10_00732NmrA domain-containing protein. (307 aa)
PV10_00555Uncharacterized protein. (291 aa)
PV10_00404Uncharacterized protein. (357 aa)
PV10_00954Uncharacterized protein. (690 aa)
PV10_08904Uncharacterized protein. (345 aa)
PV10_00038Uncharacterized protein. (654 aa)
PV10_03578Pre-mRNA-processing-splicing factor 8, variant. (2356 aa)
PV10_03505Sm domain-containing protein. (140 aa)
PV10_08258Matrin-type domain-containing protein. (238 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
PV10_03284RRM domain-containing protein. (283 aa)
PV10_08030Uncharacterized protein. (209 aa)
PV10_08025Uncharacterized protein. (705 aa)
PV10_03083DUF2040 domain-containing protein. (409 aa)
PV10_03604DUF1716 domain-containing protein. (607 aa)
PV10_08998Uncharacterized protein. (543 aa)
PV10_02811Pre-mRNA-splicing factor cwc15. (229 aa)
PV10_02685Protein kinase domain-containing protein. (746 aa)
PV10_02016Uncharacterized protein. (554 aa)
PV10_01955Protein kinase domain-containing protein. (568 aa)
PV10_02363Uncharacterized protein. (592 aa)
B0A52_09991Sm domain-containing protein. (223 aa)
PV10_04919DBR1 domain-containing protein. (796 aa)
B0A52_01428Small nuclear ribonucleoprotein Sm D2. (114 aa)
PV10_05262Uncharacterized protein. (253 aa)
PV10_05171J domain-containing protein. (258 aa)
PV10_04345Uncharacterized protein. (305 aa)
PV10_05086Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43. (800 aa)
PV10_04877Uncharacterized protein. (1753 aa)
PV10_06657Uncharacterized protein. (990 aa)
PV10_06548Uncharacterized protein. (983 aa)
PV10_03803Uncharacterized protein. (250 aa)
PV10_03744Uncharacterized protein. (251 aa)
PV10_06719Uncharacterized protein. (356 aa)
PV10_06403Nuclear cap-binding protein subunit 2. (175 aa)
PV10_05684Uncharacterized protein. (160 aa)
PV10_05877Uncharacterized protein. (344 aa)
PV10_05868Uncharacterized protein. (203 aa)
PV10_07852Pinin_SDK_memA domain-containing protein. (355 aa)
PV10_05826WD_REPEATS_REGION domain-containing protein. (335 aa)
PV10_07460Uncharacterized protein. (2229 aa)
PV10_07278Protein kinase domain-containing protein. (609 aa)
PV10_05343Uncharacterized protein. (589 aa)
PV10_07570Uncharacterized protein. (177 aa)
PV10_07523U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (571 aa)
PV10_08546U1-type domain-containing protein. (288 aa)
PV10_08223Uncharacterized protein. (1189 aa)
PV10_08215G-patch domain-containing protein. (534 aa)
PV10_08855WD_REPEATS_REGION domain-containing protein. (360 aa)
PV10_08984Uncharacterized protein. (237 aa)
PV10_08188Protein kinase domain-containing protein. (324 aa)
PV10_08116Uncharacterized protein. (770 aa)
PV10_08012Nop domain-containing protein. (602 aa)
Your Current Organism:
Exophiala mesophila
NCBI taxonomy Id: 212818
Other names: CBS 402.95, E. mesophila
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