7 items (Exophiala mesophila) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV10_04035	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (463 aa)
	PV10_01662	Uncharacterized protein. (634 aa)
	PV10_00436	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (508 aa)
	PV10_02711	DNA repair helicase rad15. (818 aa)
	PV10_05091	Uncharacterized protein. (448 aa)
	PV10_00388	Uncharacterized protein. (78 aa)
	PV10_06736	Uncharacterized protein. (846 aa)

Your Current Organism:

Exophiala mesophila

NCBI taxonomy Id: 212818
Other names: CBS 402.95, E. mesophila

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV10_00388	PV10_00436	A0A0D1Y777	A0A0D1ZPS5	Uncharacterized protein.	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.999
PV10_00388	PV10_01662	A0A0D1Y777	A0A0D1ZTU8	Uncharacterized protein.	Uncharacterized protein.	0.997
PV10_00388	PV10_02711	A0A0D1Y777	A0A0D1ZKA8	Uncharacterized protein.	DNA repair helicase rad15.	0.997
PV10_00388	PV10_04035	A0A0D1Y777	A0A0D1ZFY4	Uncharacterized protein.	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family.	0.997
PV10_00388	PV10_05091	A0A0D1Y777	A0A0D1ZGV8	Uncharacterized protein.	Uncharacterized protein.	0.999
PV10_00388	PV10_06736	A0A0D1Y777	A0A0D1ZE99	Uncharacterized protein.	Uncharacterized protein.	0.998
PV10_00436	PV10_00388	A0A0D1ZPS5	A0A0D1Y777	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	Uncharacterized protein.	0.999
PV10_00436	PV10_01662	A0A0D1ZPS5	A0A0D1ZTU8	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	Uncharacterized protein.	0.999
PV10_00436	PV10_02711	A0A0D1ZPS5	A0A0D1ZKA8	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	DNA repair helicase rad15.	0.999
PV10_00436	PV10_04035	A0A0D1ZPS5	A0A0D1ZFY4	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family.	0.999
PV10_00436	PV10_05091	A0A0D1ZPS5	A0A0D1ZGV8	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	Uncharacterized protein.	0.999
PV10_00436	PV10_06736	A0A0D1ZPS5	A0A0D1ZE99	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	Uncharacterized protein.	0.999
PV10_01662	PV10_00388	A0A0D1ZTU8	A0A0D1Y777	Uncharacterized protein.	Uncharacterized protein.	0.997
PV10_01662	PV10_00436	A0A0D1ZTU8	A0A0D1ZPS5	Uncharacterized protein.	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.999
PV10_01662	PV10_02711	A0A0D1ZTU8	A0A0D1ZKA8	Uncharacterized protein.	DNA repair helicase rad15.	0.999
PV10_01662	PV10_04035	A0A0D1ZTU8	A0A0D1ZFY4	Uncharacterized protein.	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family.	0.999
PV10_01662	PV10_05091	A0A0D1ZTU8	A0A0D1ZGV8	Uncharacterized protein.	Uncharacterized protein.	0.999
PV10_01662	PV10_06736	A0A0D1ZTU8	A0A0D1ZE99	Uncharacterized protein.	Uncharacterized protein.	0.999
PV10_02711	PV10_00388	A0A0D1ZKA8	A0A0D1Y777	DNA repair helicase rad15.	Uncharacterized protein.	0.997
PV10_02711	PV10_00436	A0A0D1ZKA8	A0A0D1ZPS5	DNA repair helicase rad15.	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.999