47 items (Exophiala mesophila) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV10_01165	Uncharacterized protein. (766 aa)
	B0A52_01579	40S ribosomal protein S16-B; Belongs to the universal ribosomal protein uS9 family. (143 aa)
	PV10_07365	18S rRNA biogenesis protein RCL1. (405 aa)
	PV10_05517	Fcf2 domain-containing protein. (227 aa)
	PV10_06376	Uncharacterized protein. (918 aa)
	PV10_01953	Uncharacterized protein. (1004 aa)
	PV10_02527	ATP-dependent rRNA helicase RRP3; Belongs to the DEAD box helicase family. (496 aa)
	PV10_00469	Uncharacterized protein. (384 aa)
	PV10_01007	CBF domain-containing protein. (290 aa)
	PV10_01786	Bms1-type G domain-containing protein. (1173 aa)
	PV10_07963	Kri1_C domain-containing protein. (597 aa)
	PV10_05707	Uncharacterized protein. (287 aa)
	PV10_06033	Uncharacterized protein. (1284 aa)
	PV10_06422	Uncharacterized protein. (577 aa)
	PV10_03701	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (125 aa)
	PV10_02329	Pre-rRNA-processing protein PNO1. (263 aa)
	PV10_02871	Nucleolar protein 58. (624 aa)
	B0A52_07527	rRNA-processing protein FCF1. (193 aa)
	B0A52_04046	40S ribosomal protein S21; Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Has a physiological role leading to 18S rRNA stability. (88 aa)
	PV10_01503	WD_REPEATS_REGION domain-containing protein. (555 aa)
	PV10_01513	Bms1-type G domain-containing protein. (806 aa)
	PV10_08407	Uncharacterized protein. (439 aa)
	PV10_08440	Uncharacterized protein. (286 aa)
	PV10_07328	40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family. (151 aa)
	PV10_07749	WD_REPEATS_REGION domain-containing protein. (973 aa)
	PV10_07488	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (344 aa)
	PV10_06744	WD_REPEATS_REGION domain-containing protein. (889 aa)
	PV10_04622	RIO domain-containing protein. (392 aa)
	PV10_04662	Uncharacterized protein. (1815 aa)
	B0A52_07938	Uncharacterized protein. (272 aa)
	PV10_02494	Uncharacterized protein. (382 aa)
	PV10_02168	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (233 aa)
	PV10_02365	WD_REPEATS_REGION domain-containing protein. (934 aa)
	PV10_03074	NUC153 domain-containing protein. (728 aa)
	PV10_00184	WD_REPEATS_REGION domain-containing protein. (533 aa)
	B0A52_07157	40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (151 aa)
	B0A52_04749	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (203 aa)
	PV10_07697	Uncharacterized protein. (519 aa)
	PV10_05529	Adenylate kinase isoenzyme 6 homolog; Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates. Has also ATPase activity. May be involved in rRNA maturation and transcription regulation. (191 aa)
	PV10_06364	Uncharacterized protein. (210 aa)
	PV10_06547	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (402 aa)
	PV10_03690	Sas10 domain-containing protein. (607 aa)
	PV10_05181	Uncharacterized protein. (890 aa)
	PV10_02369	WD_REPEATS_REGION domain-containing protein. (599 aa)
	PV10_02677	WD_REPEATS_REGION domain-containing protein. (440 aa)
	PV10_01510	Utp12 domain-containing protein. (894 aa)
	PV10_01668	Uncharacterized protein. (931 aa)

Your Current Organism:

Exophiala mesophila

NCBI taxonomy Id: 212818
Other names: CBS 402.95, E. mesophila

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B0A52_01579	B0A52_04046	A0A0D1WLV6	A0A0D1Y562	40S ribosomal protein S16-B; Belongs to the universal ribosomal protein uS9 family.	40S ribosomal protein S21; Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Has a physiological role leading to 18S rRNA stability.	0.870
B0A52_01579	B0A52_04749	A0A0D1WLV6	A0A0D1ZTF1	40S ribosomal protein S16-B; Belongs to the universal ribosomal protein uS9 family.	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	0.999
B0A52_01579	B0A52_07157	A0A0D1WLV6	A0A0D1ZNV7	40S ribosomal protein S16-B; Belongs to the universal ribosomal protein uS9 family.	40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.	0.999
B0A52_01579	B0A52_07527	A0A0D1WLV6	A0A0D1Y3U9	40S ribosomal protein S16-B; Belongs to the universal ribosomal protein uS9 family.	rRNA-processing protein FCF1.	0.974
B0A52_01579	B0A52_07938	A0A0D1WLV6	A0A0D1ZIV7	40S ribosomal protein S16-B; Belongs to the universal ribosomal protein uS9 family.	Uncharacterized protein.	0.860
B0A52_01579	PV10_00184	A0A0D1WLV6	A0A0D1ZNT1	40S ribosomal protein S16-B; Belongs to the universal ribosomal protein uS9 family.	WD_REPEATS_REGION domain-containing protein.	0.974
B0A52_01579	PV10_00469	A0A0D1WLV6	A0A0D1X4D2	40S ribosomal protein S16-B; Belongs to the universal ribosomal protein uS9 family.	Uncharacterized protein.	0.974
B0A52_01579	PV10_01007	A0A0D1WLV6	A0A0D1X610	40S ribosomal protein S16-B; Belongs to the universal ribosomal protein uS9 family.	CBF domain-containing protein.	0.976
B0A52_01579	PV10_01503	A0A0D1WLV6	A0A0D1YAY1	40S ribosomal protein S16-B; Belongs to the universal ribosomal protein uS9 family.	WD_REPEATS_REGION domain-containing protein.	0.975
B0A52_01579	PV10_01510	A0A0D1WLV6	A0A0D2AFV7	40S ribosomal protein S16-B; Belongs to the universal ribosomal protein uS9 family.	Utp12 domain-containing protein.	0.974
B0A52_01579	PV10_01513	A0A0D1WLV6	A0A0D1YAZ2	40S ribosomal protein S16-B; Belongs to the universal ribosomal protein uS9 family.	Bms1-type G domain-containing protein.	0.918
B0A52_01579	PV10_01668	A0A0D1WLV6	A0A0D2AGE4	40S ribosomal protein S16-B; Belongs to the universal ribosomal protein uS9 family.	Uncharacterized protein.	0.975
B0A52_01579	PV10_01786	A0A0D1WLV6	A0A0D1X836	40S ribosomal protein S16-B; Belongs to the universal ribosomal protein uS9 family.	Bms1-type G domain-containing protein.	0.981
B0A52_01579	PV10_01953	A0A0D1WLV6	A0A0D1WXL9	40S ribosomal protein S16-B; Belongs to the universal ribosomal protein uS9 family.	Uncharacterized protein.	0.974
B0A52_01579	PV10_02168	A0A0D1WLV6	A0A0D1ZKG5	40S ribosomal protein S16-B; Belongs to the universal ribosomal protein uS9 family.	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.	0.433
B0A52_01579	PV10_02329	A0A0D1WLV6	A0A0D1Y220	40S ribosomal protein S16-B; Belongs to the universal ribosomal protein uS9 family.	Pre-rRNA-processing protein PNO1.	0.937
B0A52_01579	PV10_02365	A0A0D1WLV6	A0A0D1ZL13	40S ribosomal protein S16-B; Belongs to the universal ribosomal protein uS9 family.	WD_REPEATS_REGION domain-containing protein.	0.977
B0A52_01579	PV10_02369	A0A0D1WLV6	A0A0D2A6K8	40S ribosomal protein S16-B; Belongs to the universal ribosomal protein uS9 family.	WD_REPEATS_REGION domain-containing protein.	0.976
B0A52_01579	PV10_02494	A0A0D1WLV6	A0A0D1ZJF3	40S ribosomal protein S16-B; Belongs to the universal ribosomal protein uS9 family.	Uncharacterized protein.	0.941
B0A52_01579	PV10_02527	A0A0D1WLV6	A0A0D1WZ62	40S ribosomal protein S16-B; Belongs to the universal ribosomal protein uS9 family.	ATP-dependent rRNA helicase RRP3; Belongs to the DEAD box helicase family.	0.728