28 items (Exophiala mesophila) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV10_02365	WD_REPEATS_REGION domain-containing protein. (934 aa)
	PV10_05517	Fcf2 domain-containing protein. (227 aa)
	B0A52_04046	40S ribosomal protein S21; Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Has a physiological role leading to 18S rRNA stability. (88 aa)
	PV10_01503	WD_REPEATS_REGION domain-containing protein. (555 aa)
	PV10_01513	Bms1-type G domain-containing protein. (806 aa)
	PV10_08407	Uncharacterized protein. (439 aa)
	PV10_04506	Uncharacterized protein. (283 aa)
	PV10_06062	RAI1 domain-containing protein. (294 aa)
	PV10_07365	18S rRNA biogenesis protein RCL1. (405 aa)
	B0A52_07527	rRNA-processing protein FCF1. (193 aa)
	PV10_02871	Nucleolar protein 58. (624 aa)
	PV10_02329	Pre-rRNA-processing protein PNO1. (263 aa)
	PV10_04507	Uncharacterized protein. (355 aa)
	PV10_03890	F-box domain-containing protein. (350 aa)
	PV10_07963	Kri1_C domain-containing protein. (597 aa)
	PV10_01786	Bms1-type G domain-containing protein. (1173 aa)
	PV10_01165	Uncharacterized protein. (766 aa)
	PV10_01007	CBF domain-containing protein. (290 aa)
	PV10_07697	Uncharacterized protein. (519 aa)
	PV10_02369	WD_REPEATS_REGION domain-containing protein. (599 aa)
	PV10_01668	Uncharacterized protein. (931 aa)
	PV10_07749	WD_REPEATS_REGION domain-containing protein. (973 aa)
	PV10_02168	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (233 aa)
	B0A52_07938	Uncharacterized protein. (272 aa)
	PV10_04662	Uncharacterized protein. (1815 aa)
	PV10_03891	Brix domain-containing protein. (342 aa)
	PV10_06744	WD_REPEATS_REGION domain-containing protein. (889 aa)
	PV10_07488	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (344 aa)

Your Current Organism:

Exophiala mesophila

NCBI taxonomy Id: 212818
Other names: CBS 402.95, E. mesophila

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B0A52_04046	PV10_01513	A0A0D1Y562	A0A0D1YAZ2	40S ribosomal protein S21; Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Has a physiological role leading to 18S rRNA stability.	Bms1-type G domain-containing protein.	0.620
B0A52_04046	PV10_02329	A0A0D1Y562	A0A0D1Y220	40S ribosomal protein S21; Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Has a physiological role leading to 18S rRNA stability.	Pre-rRNA-processing protein PNO1.	0.620
B0A52_04046	PV10_07697	A0A0D1Y562	A0A0D1ZUB4	40S ribosomal protein S21; Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Has a physiological role leading to 18S rRNA stability.	Uncharacterized protein.	0.964
B0A52_07527	B0A52_07938	A0A0D1Y3U9	A0A0D1ZIV7	rRNA-processing protein FCF1.	Uncharacterized protein.	0.504
B0A52_07527	PV10_01007	A0A0D1Y3U9	A0A0D1X610	rRNA-processing protein FCF1.	CBF domain-containing protein.	0.999
B0A52_07527	PV10_01165	A0A0D1Y3U9	A0A0D1X6F5	rRNA-processing protein FCF1.	Uncharacterized protein.	0.400
B0A52_07527	PV10_01503	A0A0D1Y3U9	A0A0D1YAY1	rRNA-processing protein FCF1.	WD_REPEATS_REGION domain-containing protein.	0.999
B0A52_07527	PV10_01513	A0A0D1Y3U9	A0A0D1YAZ2	rRNA-processing protein FCF1.	Bms1-type G domain-containing protein.	0.700
B0A52_07527	PV10_01668	A0A0D1Y3U9	A0A0D2AGE4	rRNA-processing protein FCF1.	Uncharacterized protein.	0.999
B0A52_07527	PV10_01786	A0A0D1Y3U9	A0A0D1X836	rRNA-processing protein FCF1.	Bms1-type G domain-containing protein.	0.997
B0A52_07527	PV10_02168	A0A0D1Y3U9	A0A0D1ZKG5	rRNA-processing protein FCF1.	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.	0.429
B0A52_07527	PV10_02329	A0A0D1Y3U9	A0A0D1Y220	rRNA-processing protein FCF1.	Pre-rRNA-processing protein PNO1.	0.976
B0A52_07527	PV10_02365	A0A0D1Y3U9	A0A0D1ZL13	rRNA-processing protein FCF1.	WD_REPEATS_REGION domain-containing protein.	0.990
B0A52_07527	PV10_02369	A0A0D1Y3U9	A0A0D2A6K8	rRNA-processing protein FCF1.	WD_REPEATS_REGION domain-containing protein.	0.993
B0A52_07527	PV10_02871	A0A0D1Y3U9	A0A0D1Y3I2	rRNA-processing protein FCF1.	Nucleolar protein 58.	0.996
B0A52_07527	PV10_03890	A0A0D1Y3U9	A0A0D1XWM9	rRNA-processing protein FCF1.	F-box domain-containing protein.	0.688
B0A52_07527	PV10_03891	A0A0D1Y3U9	A0A0D1ZD64	rRNA-processing protein FCF1.	Brix domain-containing protein.	0.688
B0A52_07527	PV10_04662	A0A0D1Y3U9	A0A0D1ZHX6	rRNA-processing protein FCF1.	Uncharacterized protein.	0.998
B0A52_07527	PV10_05517	A0A0D1Y3U9	A0A0D1WPD4	rRNA-processing protein FCF1.	Fcf2 domain-containing protein.	0.986
B0A52_07527	PV10_06744	A0A0D1Y3U9	A0A0D1ZC62	rRNA-processing protein FCF1.	WD_REPEATS_REGION domain-containing protein.	0.986