STRINGSTRING
PV10_07531 PV10_07531 B0A52_06559 B0A52_06559 PV10_08535 PV10_08535 PV10_05811 PV10_05811 PV10_06236 PV10_06236 PV10_04433 PV10_04433 PV10_02580 PV10_02580 PV10_00274 PV10_00274 PV10_06639 PV10_06639 PV10_07024 PV10_07024 PV10_01196 PV10_01196 PV10_05344 PV10_05344 PV10_06700 PV10_06700 PV10_09170 PV10_09170 PV10_06913 PV10_06913
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PV10_07531CID domain-containing protein. (502 aa)
B0A52_06559Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (126 aa)
PV10_08535Uncharacterized protein. (487 aa)
PV10_05811Uncharacterized protein. (1242 aa)
PV10_06236Transcription elongation factor S-II, variant. (306 aa)
PV10_04433DUF3591 domain-containing protein. (1125 aa)
PV10_02580Uncharacterized protein. (621 aa)
PV10_00274Plus3 domain-containing protein. (606 aa)
PV10_06639mRNA-capping enzyme subunit alpha; Second step of mRNA capping. Transfer of the GMP moiety of GTP to the 5'-end of RNA via an enzyme-GMP covalent reaction intermediate; Belongs to the eukaryotic GTase family. (427 aa)
PV10_07024Uncharacterized protein. (556 aa)
PV10_01196Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (705 aa)
PV10_05344ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (513 aa)
PV10_06700TFIIS N-terminal domain-containing protein. (401 aa)
PV10_09170CID domain-containing protein. (657 aa)
PV10_06913CDC73_C domain-containing protein. (446 aa)
Your Current Organism:
Exophiala mesophila
NCBI taxonomy Id: 212818
Other names: CBS 402.95, E. mesophila
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